Plant Ontology Release #0409 April 2009
Plant Ontology Database
Ontology updates
Number of terms:
Total terms (not including obsoletes) 1046 Total children terms in Plant structure (not including obsoletes) 808 Total children terms in Plant growth and development (not including obsoletes) 236 Associations / Aannotations
Number of associations/annotations:
Total number of associations 557692 Number of associations NEW 484332 Total number of unique objects (genes, germplasms, QTLs) 45015 Number of unique objects NEW 17485
Number of associations by source DB:
DB Associations Total# TAIR (Arabidopsis) 501863 NASC (Arabidopsis) 1897 Gramene (rice) 29757 MaizeGDB (maize) 7601 SGN (Capsicum, Hyoscyamus, lycopersicum, tabacum, tuberosum, melongena) 16574 Total number of individual object types by source DB:
DB Object Type Object Types Total# TAIR (Arabidopsis) gene 23861 NASC (Arabidopsis) germplasm 1897 Gramene (rice) gene 1713 Gramene (rice) QTL 8558 MaizeGDB (maize) gene 1006 MaizeGDB (maize) germplasm 3928 SGN gene 45 SGN germplasm 4007 Total number of associations by evidence code:
Evidence Code Associations Total# IC 17973 IDA 13729 IEA 1 IEP 488313 IMP 32448 ISS 21 NAS 29 TAS 5321 Total number of object types by evidence code:
Object Type Evidence Code Object Type Total# gene IC 544 gene IDA 13727 gene IEA 1 gene IEP 488313 gene IMP 2406 gene ISS 21 gene NAS 29 gene TAS 5321 QTL IC 17429 QTL IMP 6304 germplasm IMP 23738 germplasm IDA 2