root cap

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Annotations to root cap ; PO:0020123 and its children

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root cap ; PO:0020123

A portion of root parenchyma (PO:0025095) tissue that is part of the root tip (PO:0000025) and covers the root apical meristem (PO:0020147).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCB4
AT2G47000
protein from Arabidopsis thaliana PMID:16243904 TAIR GO
ABCI17
AT1G67940
protein from Arabidopsis thaliana PMID:20498340 TAIR GO
ACT12
AT3G46520
protein from Arabidopsis thaliana PMID:8771777 TAIR GO
adh1
alcohol dehydrogenase1
gene from Zea mays
  • IMP
    • With from MaizeGDB:Adh1-3F1124r53
MaizeGDB:13497 MaizeGDB
AGL17
AT2G22630
protein from Arabidopsis thaliana PMID:11855641 TAIR GO
ANNAT1
AT1G35720
protein from Arabidopsis thaliana PMID:15368128 TAIR GO
AO1
AT4G14940
protein from Arabidopsis thaliana PMID:9681017 TAIR GO
AtIPS1
At4g39800
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
BOR1
AT2G47160
protein from Arabidopsis thaliana PMID:20194745 TAIR GO
CKX2
AT2G19500
protein from Arabidopsis thaliana PMID:14555694 TAIR GO
MYB77
AT3G50060
protein from Arabidopsis thaliana PMID:17675404 TAIR GO
NAS1
GOLD HULL AND INTERNODE 2
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
QQS
AT3G30720
protein from Arabidopsis thaliana PMID:19154206 TAIR GO
SHN3
AT5G25390
protein from Arabidopsis thaliana PMID:15319479 TAIR GO
SULTR2;1
AT5G10180
protein from Arabidopsis thaliana PMID:9380766 TAIR GO
TBP1
PLASTOCHRON2
gene from Oryza sativa PMID:17586654 Gramene
(via Gramene Genes)
TIP2
AT3G26520
protein from Arabidopsis thaliana PMID:19922653 TAIR GO
Tudor1
AT5G07350
protein from Arabidopsis thaliana PMID:20484005 TAIR GO
Tudor2
AT5G61780
protein from Arabidopsis thaliana PMID:20484005 TAIR GO
UGE1
AT1G12780
protein from Arabidopsis thaliana PMID:16644739 TAIR GO
UGE2
AT4G23920
protein from Arabidopsis thaliana PMID:14973160 TAIR GO

central root cap ; PO:0020130

A portion of root parenchyma tissue that is the central part of a root cap in which the cells are arranged in longitudinal files.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ARABIDILLO-2
AT3G60350
protein from Arabidopsis thaliana PMID:16434475 TAIR GO
ARF16
AT4G30080
protein from Arabidopsis thaliana PMID:16006581 TAIR GO
ARK3
AT1G12430
protein from Arabidopsis thaliana PMID:17971038 TAIR GO
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
PAN
AT1G68640
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
PLT1
At3g20840
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PLT2
At1g51190
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
WOX13
AT4G35550
protein from Arabidopsis thaliana PMID:18950478 TAIR GO

central root cap of primary root ; PO:0003021

A central root cap that is part of a root cap of primary root.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCB4
AT2G47000
protein from Arabidopsis thaliana PMID:16243904 TAIR GO
AGL21
AT4G37940
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
AUX1
AT2G38120
protein from Arabidopsis thaliana PMID:16244669 TAIR GO
EPC1
AT3G55830
protein from Arabidopsis thaliana PMID:16045474 TAIR GO
ERD6
AT1G08930
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
HB-8
AT4G32880
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
MYB66
AT5G14750
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
RR5
AT3G48100
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
WIP4
AT3G20880
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
WRKY14
AT1G30650
protein from Arabidopsis thaliana PMID:16581911 TAIR GO

lateral root cap ; PO:0020131

A portion of root parenchyma tissue that is part of a root cap and is parallel to the sides of a root axis.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCB4
AT2G47000
protein from Arabidopsis thaliana PMID:18156217 TAIR GO
ABCG37
AT3G53480
protein from Arabidopsis thaliana PMID:20498067 TAIR GO
AGL19
AT4G22950
protein from Arabidopsis thaliana PMID:11115127 TAIR GO
ANL2
AT4G00730
protein from Arabidopsis thaliana PMID:21421418 TAIR GO
ARF16
AT4G30080
protein from Arabidopsis thaliana PMID:16006581 TAIR GO
AUX1
AT2G38120
protein from Arabidopsis thaliana PMID:16244669 TAIR GO
BOR1
AT2G47160
protein from Arabidopsis thaliana PMID:20194745 TAIR GO
CASPL2A1
AT1G17200
protein from Arabidopsis thaliana PMID:24920445 TAIR GO
CLE1
AT1G73165
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE16
AT2G01505
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE18
AT1G66145
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
UGE1
AT1G12780
protein from Arabidopsis thaliana PMID:16644739 TAIR GO
UGE2
AT4G23920
protein from Arabidopsis thaliana PMID:16644739 TAIR GO
WOX13
AT4G35550
protein from Arabidopsis thaliana PMID:18950478 TAIR GO

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