plant zygote stage

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Annotations to plant zygote stage ; PO:0001097 and its children

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plant zygote ; PO:0000423

A native plant cell (PO:0025606) which is a whole plant (PO:0000003) in the plant zygote stage (PO:0001097).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGL29
AT2G34440 		protein from Arabidopsis thaliana PMID:20631316 TAIR GO
AGL38
AT1G65300 		protein from Arabidopsis thaliana PMID:20631316 TAIR GO
PHE1
AT1G65330 		protein from Arabidopsis thaliana PMID:20631316 TAIR GO
RBR1
AT3G12280 		protein from Arabidopsis thaliana PMID:17555967 TAIR GO
SSP
AT2G17090 		protein from Arabidopsis thaliana PMID:19286558 TAIR GO
WOX2
AT5G59340 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO
WOX8
AT5G45980 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO

embryo apical cell ; PO:0025284

A sporophyte meristematic apical cell that is part of a plant embryo and is the uppermost cell formed after the first division of a zygote.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ATML1
AT4G21750 		protein from Arabidopsis thaliana PMID:8989876 TAIR GO
WOX2
AT5G59340 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO

embryo basal cell ; PO:0002002

A native plant cell (PO:0025606) that is the lower-most cell formed after the first division of the plant zygote (PO:0000423) and is part of a plant embryo (PO:0009009).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ATML1
AT4G21750 		protein from Arabidopsis thaliana PMID:17301085 TAIR GO
HB-3
AT2G33880 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO
WOX8
AT5G45980 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO

suspensor ; PO:0020108

An embryonic plant structure at the base of a plant embryo that develops from an embryonic basal cell and connects an embryo proper to the wall of a megagametophyte.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ATML1
AT4G21750 		protein from Arabidopsis thaliana PMID:17301085 TAIR GO
BIN2
AT4G18710 		protein from Arabidopsis thaliana TAIR:Publication:501702862 TAIR GO
CYL1
AT5G13690 		protein from Arabidopsis thaliana PMID:18782908 TAIR GO
FUS3
AT3G26790 		protein from Arabidopsis thaliana PMID:14675433 TAIR GO
MYB5
AT3G13540 		protein from Arabidopsis thaliana PMID:19136646 TAIR GO
PCN
AT4G07410 		protein from Arabidopsis thaliana PMID:22158464 TAIR GO
PFS2
AT2G01500 		protein from Arabidopsis thaliana PMID:15659481 TAIR GO
SUS1
At1g01040 		gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SUS2
At1g80070 		gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SUT2
AT2G02860 		protein from Arabidopsis thaliana PMID:16169962 TAIR GO
TRO
AT1G51450 		protein from Arabidopsis thaliana PMID:20118203 TAIR GO
TWN2
At1g14610 		gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
WOX8
AT5G45980 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO

embryo hypophysis ; PO:0020109

A native plant cell (PO:0025606) that is the uppermost cell of a suspensor (PO:0020108) and from which part of the root (PO:0009005) and root cap (PO:0020123) in a plant embryo (PO:0009009) of angiosperms are derived.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
BS1
AT1G74500 		protein from Arabidopsis thaliana PMID:20220754 TAIR GO
HB-3
AT2G33880 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO
NPY2
AT2G14820 		protein from Arabidopsis thaliana PMID:19075219 TAIR GO
WOX8
AT5G45980 		protein from Arabidopsis thaliana PMID:14711878 TAIR GO

sporophyte vegetative stage ; PO:0007134

A sporophyte development stage (PO:0028002) that occurs during the interval between the first division of a plant zygote (PO:0000423) and the formation of a sporangium (PO:0025094).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
3-025 germplasm from Solanum lycopersicum SGN ref:861 SGN
(via SGN Germplasm)
3-047 germplasm from Solanum lycopersicum SGN ref:861 SGN
(via SGN Germplasm)
ABI5
AT2G36270 		protein from Arabidopsis thaliana PMID:10760247 TAIR GO
ABXSTOFQ
abaxial stomatal frequency 		QTL from Oryza sativa GR ref:7810 Gramene
(via Gramene QTL)
ABXSTOFQ
abaxial stomatal frequency 		QTL from Oryza sativa GR ref:7810 Gramene
(via Gramene QTL)
ADS
ADAXIAL SNOWY LEAF 		gene from Oryza sativa GR ref:0 Gramene
(via Gramene Genes)
ADXSTOFQ
adaxial stomatal frequency 		QTL from Oryza sativa GR ref:7810 Gramene
(via Gramene QTL)
ADXSTOFQ
adaxial stomatal frequency 		QTL from Oryza sativa GR ref:7810 Gramene
(via Gramene QTL)
Aox4
Alternative oxydase-4 		gene from Oryza sativa PMID:12669200 Gramene
(via Gramene Genes)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
BARTTH
basal root thickness 		QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)

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