shoot system vascular system

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Annotations to shoot system vascular system ; PO:0025205 and its children

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shoot system vascular system ; PO:0025205

A vascular system that is part of a shoot system.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

flower vascular system ; PO:0005017

A shoot system vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a flower.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGL12
AT1G71692
protein from Arabidopsis thaliana PMID:18203871 TAIR GO
CVP2
AT1G05470
protein from Arabidopsis thaliana PMID:15100402 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
NUC-L1
AT1G48920
protein from Arabidopsis thaliana PMID:17369435 TAIR GO
SOFL1
AT1G26210
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SOFL2
AT1G68870
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
WOX13
AT4G35550
protein from Arabidopsis thaliana PMID:18950478 TAIR GO

petal vascular system ; PO:0000054

A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a petal (PO:0025218).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G39590.1
AT4G39590
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AtVEX1
AT5G62850
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CLE16
AT2G01505
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CYP704B1
AT1G69500
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GA3OX3
AT4G21690
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ht2
hexose transporter 2
gene from Solanum lycopersicum PMID:11198428 SGN
(via SGN Genes)
GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC1
AT1G18140
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC5
AT2G40370
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MLO6
AT1G61560
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MSS1
AT5G26340
protein from Arabidopsis thaliana PMID:16616142 TAIR GO
NDT2
AT1G25380
protein from Arabidopsis thaliana PMID:19745225 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PRS
AT2G28610
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
RSW10
AT1G71100
protein from Arabidopsis thaliana PMID:17059404 TAIR GO
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SIN2
At2g41670
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

sepal vascular system ; PO:0004723

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a sepal.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
ARGAH2
AT4G08870
protein from Arabidopsis thaliana PMID:18425591 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CLE16
AT2G01505
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE18
AT1G66145
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CYP704B1
AT1G69500
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO
GA3OX1
AT1G15550
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC1
AT1G18140
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC5
AT2G40370
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
MIPS3
AT5G10170
protein from Arabidopsis thaliana PMID:20215587 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PUM9
AT1G35730
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
RR13
AT2G27070
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RSW10
AT1G71100
protein from Arabidopsis thaliana PMID:17059404 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

anther vascular system ; PO:0008013

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a anther.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO

filament vascular system ; PO:0008014

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a filament.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO

inflorescence vascular system ; PO:0005028

A shoot system vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in an inflorescence.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO

carpel vascular system ; PO:0005019

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a carpel.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
flo4
GRAIN INCOMPLETE FILLING 1
gene from Oryza sativa PMID:18820698 Gramene
(via Gramene Genes)
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO

stigma vascular system ; PO:0008012

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a stigma.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CIPK7
AT3G23000
protein from Arabidopsis thaliana PMID:15665497 TAIR GO

leaf vascular system ; PO:0000036

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG25
AT1G71960
protein from Arabidopsis thaliana PMID:20133881 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABF2
AT1G45249
protein from Arabidopsis thaliana PMID:16284313 TAIR GO
AGL28
AT1G01530
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AGP40
AT3G20865
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
APUM23
At1g72320
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G73560.1
AT1G73560
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G77200.1
AT1G77200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G80580.1
AT1G80580
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G22760.1
AT2G22760
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G33260.1
AT2G33260
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G44300.1
AT2G44300
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
AT2G47050.1
AT2G47050
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G14880.1
AT3G14880
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G46960.1
AT3G46960
protein from Arabidopsis thaliana PMID:21535471 TAIR GO
AT4G29650.1
AT4G29650
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G39590.1
AT4G39590
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G14980.1
AT5G14980
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G17080.1
AT5G17080
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G58680.1
AT5G58680
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ATH1
AT4G32980
protein from Arabidopsis thaliana PMID:17908157 TAIR GO
ATSBT5.2
AT1G20160
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
ATSTE14B
AT5G08335
protein from Arabidopsis thaliana PMID:12472689 TAIR GO
BLOS1
AT2G30330
protein from Arabidopsis thaliana PMID:20971704 TAIR GO
BZIP17
AT2G40950
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
CAND1
AT2G02560
protein from Arabidopsis thaliana PMID:16943276 TAIR GO
CIPK7
AT3G23000
protein from Arabidopsis thaliana PMID:15665497 TAIR GO
CLE12
AT1G68795
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE18
AT1G66145
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CUL4
AT5G46210
protein from Arabidopsis thaliana PMID:16792691 TAIR GO
CVP2
AT1G05470
protein from Arabidopsis thaliana PMID:15100402 TAIR GO
CYP710A2
AT2G34490
protein from Arabidopsis thaliana PMID:16531502 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO
DAZ2
AT4G35280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
DMAS1
Zinc-regulated transporter 1
gene from Oryza sativa PMID:16263903 Gramene
(via Gramene Genes)
DOT3
At5g10250
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DOT5
At1g13290
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DSO4
At1g17840
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
E13L3
AT5G08000
protein from Arabidopsis thaliana PMID:19223515 TAIR GO
FKD1
AT3G63300
protein from Arabidopsis thaliana PMID:20626652 TAIR GO
FRA8
AT2G28110
protein from Arabidopsis thaliana PMID:16272433 TAIR GO
FRY1
At5g63980
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17237350 TAIR GO
GHR1
AT4G20940
protein from Arabidopsis thaliana PMID:22730405 TAIR
GORK
AT5G37500
protein from Arabidopsis thaliana PMID:14596925 TAIR GO
GRV2
AT2G26890
protein from Arabidopsis thaliana PMID:15466218 TAIR GO
HB-8
AT4G32880
protein from Arabidopsis thaliana PMID:12447534 TAIR GO
HB20
AT3G01220
protein from Arabidopsis thaliana PMID:12644682 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
HKT1
AT4G10310
protein from Arabidopsis thaliana PMID:12417304 TAIR GO
HMA4
AT2G19110
protein from Arabidopsis thaliana PMID:15670847 TAIR GO
HO3
AT1G69720
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HO4
AT1G58300
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
INT4
AT4G16480
protein from Arabidopsis thaliana PMID:16603666 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
IRX3
AT5G17420
protein from Arabidopsis thaliana PMID:17041031 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC11
AT5G03260
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC12
AT5G05390
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC5
AT2G40370
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAP2
AT4G30920
protein from Arabidopsis thaliana PMID:21569035 TAIR GO
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MLO2
AT1G11310
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO4
AT1G11000
protein from Arabidopsis thaliana PMID:16525893 TAIR
MLO6
AT1G61560
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MSL10
AT5G12080
protein from Arabidopsis thaliana PMID:18485707 TAIR GO
MYB116
AT1G25340
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB87
AT4G37780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB99
AT5G62320
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
NAS1
GOLD HULL AND INTERNODE 2
gene from Oryza sativa GR ref:5652 Gramene
(via Gramene Genes)
NAS3
PINHEAD1
gene from Oryza sativa PMID:12000455 Gramene
(via Gramene Genes)
NF-YA5
AT1G54160
protein from Arabidopsis thaliana PMID:18682547 TAIR GO
NKS1
AT4G30996
protein from Arabidopsis thaliana PMID:21227472 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
NRAMP3
AT2G23150
protein from Arabidopsis thaliana PMID:12787249 TAIR GO
NUC-L1
AT1G48920
protein from Arabidopsis thaliana PMID:17369435 TAIR GO
NUDT11
AT5G45940
protein from Arabidopsis thaliana PMID:19340986 TAIR GO
OCT1
AT1G73220
protein from Arabidopsis thaliana PMID:17521409 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
OZS1
AT1G12480
protein from Arabidopsis thaliana PMID:18305484 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PCAP1
AT4G20260
protein from Arabidopsis thaliana PMID:17264065 TAIR GO
PCR2
AT1G14870
protein from Arabidopsis thaliana PMID:20647347 TAIR GO
PDCB1
AT5G61130
protein from Arabidopsis thaliana PMID:19223515 TAIR GO
PDCB3
AT1G18650
protein from Arabidopsis thaliana PMID:19223515 TAIR GO
PDX1.2
AT3G16050
protein from Arabidopsis thaliana PMID:16766694 TAIR GO
PERK7
AT1G49270
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
PLDDELTA
AT4G35790
protein from Arabidopsis thaliana PMID:11489173 TAIR GO
PLS
AT4G39403
protein from Arabidopsis thaliana PMID:12172017 TAIR GO
PMT5
AT3G18830
protein from Arabidopsis thaliana PMID:15525644 TAIR GO
PRR3
AT5G60100
protein from Arabidopsis thaliana PMID:18055606 TAIR GO
PSK2
AT2G22860
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK3
AT3G44735
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK4
AT3G49780
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK5
AT5G65870
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
RAB1A
AT5G47200
protein from Arabidopsis thaliana PMID:21269510 TAIR GO
RGLG1
AT3G01650
protein from Arabidopsis thaliana PMID:17586653 TAIR GO
RGLG2
AT5G14420
protein from Arabidopsis thaliana PMID:17586653 TAIR GO
RKL1
AT1G48480
protein from Arabidopsis thaliana PMID:21532992 TAIR GO
RLK902
AT3G18740
protein from Arabidopsis thaliana PMID:21532992 TAIR GO
RR1
AT3G16857
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR10
AT4G31920
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR12
AT2G25180
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR13
AT2G27070
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR2
AT4G16110
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR20
AT3G62670
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
S1P
AT5G19660
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
SBT1.3
AT5G51750
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SBT3.12
AT4G21326
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SBT3.3
AT1G32960
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SE
At2g27100
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SIP4
AT2G30360
protein from Arabidopsis thaliana PMID:17483306 TAIR GO
SK6
AT3G53060
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SOX
AT3G01910
protein from Arabidopsis thaliana PMID:17425719 TAIR GO
SQS2
AT4G34650
protein from Arabidopsis thaliana PMID:18236008 TAIR GO
STV1
AT3G53020
protein from Arabidopsis thaliana PMID:16227452 TAIR GO
SUS1
AT5G20830
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SYP125
AT1G11250
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
TAA1
AT1G70560
protein from Arabidopsis thaliana PMID:18394996 TAIR GO
TGH
AT5G23080
protein from Arabidopsis thaliana PMID:16024589 TAIR GO
TRN2
AT5G46700
protein from Arabidopsis thaliana PMID:17351828 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO
UGT84A2
AT3G21560
protein from Arabidopsis thaliana PMID:17217457 TAIR GO
UPS5
AT1G26440
protein from Arabidopsis thaliana PMID:16738859 TAIR GO
UVI4
AT2G42260
protein from Arabidopsis thaliana PMID:16623893 TAIR GO
VEP1
AT4G24220
protein from Arabidopsis thaliana PMID:11917087 TAIR GO
WDR5a
AT3G49660
protein from Arabidopsis thaliana PMID:19567704 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO
XTH18
AT4G30280
protein from Arabidopsis thaliana PMID:16830179 TAIR GO
XYP2
AT2G13820
protein from Arabidopsis thaliana PMID:21558309 TAIR GO

leaf lamina vascular system ; PO:0000048

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf lamina.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO

leaf lamina vein ; PO:0020138

A phyllome lamina vein (PO:0025348) that is part of a leaf lamina vascular system (PO:0000048).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ACS4
AT2G22810
protein from Arabidopsis thaliana PMID:15699063 TAIR GO
AKN2
AT4G39940
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
APK
AT2G14750
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
APK3
AT3G03900
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
APK4
AT5G67520
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
AT3G15356.1
AT3G15356
protein from Arabidopsis thaliana PMID:19214436 TAIR GO
  • na
bm1
GRMZM5G844562
gene from Zea mays PMID:21423772 POC:Ethan Johnson
(via MaizeGDB)
  • na
bm3
AC196475.3_FG004
gene from Zea mays PMID:21423772 POC:Ethan Johnson
(via MaizeGDB)
chln
Solyc01g100490
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
CPR1
AT4G12560
protein from Arabidopsis thaliana PMID:19682297 TAIR GO
CUL1
AT4G02570
protein from Arabidopsis thaliana PMID:23319550 TAIR GO
GLU1
AT5G04140
protein from Arabidopsis thaliana PMID:16407450 TAIR GO
KCO1
AT5G55630
protein from Arabidopsis thaliana PMID:12148538 TAIR GO
N129
Reticulata: Glabra
germplasm from Arabidopsis thaliana NASC:N129 NASC
N3308 germplasm from Arabidopsis thaliana NASC:N3308 NASC
N349
rosfolmut (F71)
germplasm from Arabidopsis thaliana NASC:N349 NASC
N546
flacovcost (V76)
germplasm from Arabidopsis thaliana NASC:N546 NASC
N606
grivicht (V156)
germplasm from Arabidopsis thaliana NASC:N606 NASC
N692
varmargch (V276)
germplasm from Arabidopsis thaliana NASC:N692 NASC
NRP1
AT2G03440
protein from Arabidopsis thaliana PMID:20016941 TAIR GO
NTHK1
ethylene receptor homolog
gene from Nicotiana PMID:12154144 SGN
(via SGN Genes)
PHT4;5
AT5G20380
protein from Arabidopsis thaliana PMID:19513231 TAIR GO
PTB1
AT3G01150
protein from Arabidopsis thaliana PMID:19122186 TAIR GO
PTB2
AT5G53180
protein from Arabidopsis thaliana PMID:19122186 TAIR GO
RSH1
AT4G02260
protein from Arabidopsis thaliana PMID:18535838 TAIR GO
RSH3
AT1G54130
protein from Arabidopsis thaliana PMID:18535838 TAIR GO
SOFL1
AT1G26210
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SOFL2
AT1G68870
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SPX1
AT5G20150
protein from Arabidopsis thaliana PMID:18315545 TAIR GO
SPX3
AT2G45130
protein from Arabidopsis thaliana PMID:18315545 TAIR GO
SUS1
AT5G20830
protein from Arabidopsis thaliana PMID:8220487 TAIR GO
sut4
sucrose transporter 4
gene from Solanum lycopersicum PMID:10948254 SGN
(via SGN Genes)
GO
TRN1
AT5G55540
protein from Arabidopsis thaliana PMID:16531491 TAIR GO
TRN2
AT5G46700
protein from Arabidopsis thaliana PMID:16531491 TAIR GO
YSL1
AT4G24120
protein from Arabidopsis thaliana PMID:16297069 TAIR GO

primary leaf vein ; PO:0025413

A leaf lamina vein (PO:0020138) that connects directly to a petiole vascular system (PO:0000052) or a shoot axis vascular system (PO:0000039).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
NPF1.2
AT1G52190
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NRT1.12
AT3G16180
protein from Arabidopsis thaliana PMID:24006285 TAIR GO

leaf midvein ; PO:0020139

A primary leaf vein (PO:0025413) that is the central vein of a vascular leaf (PO:0009025).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
117B
117B bm2 gt1 ^Hi27
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
119F
119F bm2
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
201A
201A mrl1-IHO
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
209C
209C bm6-86-87-8875-6
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
415E
415E bm3-2001PR-1
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
419E
419E gl7 v17 bm3
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
4305E
4305E Pm*-N2443
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
504I
504I bm5-PI251930
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
504J
504J bm5-PI262480
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
511J
511J bm1-PI251009
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
511K
511K bm1-N2331B
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
5803C
5803C bm*-PI228174
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
5803E
5803E bm*-PI251893
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
5803I
5803I bm7-PI267186
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
AT1G11370.1
AT1G11370
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G77655.1
AT1G77655
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G03130.1
AT2G03130
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G17940.1
AT2G17940
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G11080.2
AT5G11080
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
bf1
blue fluorescent1
gene from Zea mays
  • IMP
    • With from MaizeGDB:def(Bf1..bm4)044-4
MaizeGDB:13541 MaizeGDB
bl
Solyc11g069030
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
  • na
bm1
GRMZM5G844562
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm1-N2331B
MaizeGDB:59052 POC:Ethan Johnson
(via MaizeGDB)
  • IMP
    • With from MaizeGDB:bm1
MaizeGDB:59052
  • IMP
    • With from MaizeGDB:bm1-mu1972
MaizeGDB:59052
  • IMP
    • With from MaizeGDB:bm1-PI251009
MaizeGDB:59052
  • IMP
    • With from MaizeGDB:bm1-mu1971
MaizeGDB:59052
PMID:21423772
bm2
brown midrib2
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm2
MaizeGDB:13196 MaizeGDB
  • na
bm3
AC196475.3_FG004
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm3-Burnham
MaizeGDB:13341 POC:Ethan Johnson
(via MaizeGDB)
  • IMP
    • With from MaizeGDB:bm3-1
    • With from MaizeGDB:bm3-2
MaizeGDB:13341
  • IMP
    • With from MaizeGDB:bm3-2001PR-1
MaizeGDB:13341
  • IMP
    • With from MaizeGDB:bm3-91598-3
MaizeGDB:13341
  • IMP
    • With from MaizeGDB:bm3
MaizeGDB:13341
PMID:21423772
bm4
brown midrib4
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm4
MaizeGDB:13193 MaizeGDB
bm5
brown midrib5
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm5-PI251930
MaizeGDB:1187452 MaizeGDB
  • IMP
    • With from MaizeGDB:bm5-PI262480
MaizeGDB:1187452
bm6
brown midrib6
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm6-86-87-8875-6
MaizeGDB:1187452 MaizeGDB
bm7
brown midrib7
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm7-PI267186
MaizeGDB:892690 MaizeGDB
CHAL
AT2G30370
protein from Arabidopsis thaliana PMID:20056678 TAIR GO
DL
DROOPING LEAF
gene from Oryza sativa PMID:14729915 POC:Laurel Cooper
(via Gramene Genes)
e
Solyc04g076850
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
GO
EXPA10
AT1G26770
protein from Arabidopsis thaliana PMID:10931949 TAIR GO
FBD1
AT4G13985
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GA3OX3
AT4G21690
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
Gail's Sweet Plum Tomato germplasm from Solanum lycopersicum SGN ref:861 SGN
(via SGN Germplasm)
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
LeT6
Solyc02g081120
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
lxm1
lax midrib1
gene from Zea mays
  • IMP
    • With from MaizeGDB:Lxm1-N1600
MaizeGDB:13422 MaizeGDB
  • IMP
    • With from MaizeGDB:Lxm1
MaizeGDB:13422
  • IMP
    • With from MaizeGDB:Lxm1-N1600
MaizeGDB:13422
  • IMP
    • With from MaizeGDB:Lxm1
MaizeGDB:13422
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
mrl1
midribless1
gene from Zea mays
  • IMP
    • With from MaizeGDB:mrl1-IHO
MaizeGDB:112748 MaizeGDB
  • IMP
    • With from MaizeGDB:mrl1-1
MaizeGDB:112748
NST1
AT2G46770
protein from Arabidopsis thaliana PMID:16214898 TAIR GO
pm1
pale midrib1
gene from Zea mays
  • IMP
    • With from MaizeGDB:pm1
MaizeGDB:13185 MaizeGDB
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
spc1
speckled1
gene from Zea mays
  • IMP
    • With from MaizeGDB:Spc1-N1376
MaizeGDB:58640 MaizeGDB
SPL11
SPOTTED LEAF 11
gene from Oryza sativa PMID:10939258 POC:Laurel Cooper
(via Gramene Genes)
SPX4
AT5G15330
protein from Arabidopsis thaliana PMID:18315545 TAIR GO
SYP72
AT3G45280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO

lateral leaf vein ; PO:0006011

An unbranched second order leaf vein (PO:0020140) that runs between two adjacent primary leaf veins (PO:0025413).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
LeT6
Solyc02g081120
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)

petiole vascular system ; PO:0000052

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf petiole.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ARF6
AT1G30330
protein from Arabidopsis thaliana PMID:17021043 TAIR GO
ARF8
AT5G37020
protein from Arabidopsis thaliana PMID:17021043 TAIR GO
AT1G17310.1
AT1G17310
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB87
AT4G37780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO

shoot axis vascular system ; PO:0000039

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a shoot axis.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
ANAC026
AT1G62700
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
AT1G48800.1
AT1G48800
protein from Arabidopsis thaliana PMID:20687964 TAIR
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G77200.1
AT1G77200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G44300.1
AT2G44300
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ATDUF1
AT1G03300
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
CAB2
AT1G29920
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
COV1
At2g20120
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
CYP710A1
AT2G34500
protein from Arabidopsis thaliana PMID:16531502 TAIR GO
DL
DROOPING LEAF
gene from Oryza sativa GR ref:5652 Gramene
(via Gramene Genes)
DUF5
AT2G47220
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF7
AT3G62300
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17237350 TAIR GO
GDU1
AT4G31730
protein from Arabidopsis thaliana PMID:15208395 TAIR GO
HO3
AT1G69720
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HO4
AT1G58300
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
LHCA1
AT3G54890
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB2.1
AT2G05100
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB2.3
AT3G27690
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB4.2
AT3G08940
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB4.3
AT2G40100
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB5
AT4G10340
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
MGP
AT1G03840
protein from Arabidopsis thaliana PMID:16640459 TAIR GO
NAC076
AT4G36160
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NAC101
AT5G62380
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
NAC105
AT5G66300
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NLP7
AT4G24020
protein from Arabidopsis thaliana PMID:18826430 TAIR GO
NRAMP3
AT2G23150
protein from Arabidopsis thaliana PMID:12787249 TAIR GO
NUC
AT5G44160
protein from Arabidopsis thaliana PMID:16640459 TAIR GO
NUDT11
AT5G45940
protein from Arabidopsis thaliana PMID:19340986 TAIR GO
PHO1;H1
AT1G68740
protein from Arabidopsis thaliana PMID:17461783 TAIR GO
RBCS1A
AT1G67090
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
RBCS1B
AT5G38430
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
RBCS3B
AT5G38410
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
RVE1
AT5G17300
protein from Arabidopsis thaliana PMID:19805390 TAIR GO
RXF12
AT1G58370
protein from Arabidopsis thaliana PMID:12154138 TAIR GO
SAUR68
AT1G29490
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SIP4
AT2G30360
protein from Arabidopsis thaliana PMID:17483306 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
WOL
AT2G01830
protein from Arabidopsis thaliana PMID:15155880 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO
XLG1
AT2G23460
protein from Arabidopsis thaliana PMID:17999646 TAIR GO
XLG2
AT4G34390
protein from Arabidopsis thaliana PMID:17999646 TAIR GO
XLG3
AT1G31930
protein from Arabidopsis thaliana PMID:17999646 TAIR GO
YUC8
AT4G28720
protein from Arabidopsis thaliana PMID:19805390 TAIR GO

pedicel vascular system ; PO:0005012

A shoot axis vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a pedicel.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

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