root apical meristem

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Annotations to root apical meristem ; PO:0020147 and its children

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root apical meristem ; PO:0020147

A root meristem (PO:0006085) located at the root tip (PO:0000025), behind the root cap (PO:0020123).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AIL5
AT5G57390
protein from Arabidopsis thaliana PMID:20405311 TAIR GO
ARR12
At2g25180
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
BARD1
AT1G04020
protein from Arabidopsis thaliana PMID:18591352 TAIR GO
CAT8
AT1G17120
protein from Arabidopsis thaliana PMID:15377779 TAIR GO
CR4
AT3G59420
protein from Arabidopsis thaliana PMID:18948541 TAIR GO
CRN
AT5G13290
protein from Arabidopsis thaliana PMID:18381924 TAIR GO
CYCA2;3
AT1G15570
protein from Arabidopsis thaliana PMID:16415207 TAIR GO
CYP71
AT3G44600
protein from Arabidopsis thaliana PMID:17704213 TAIR GO
FAS1
At1g65470
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
FAS2
At5g64630
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
GASR1
GA-stimulated transcript-related gene 1
gene from Oryza sativa PMID:16905871 Gramene
(via Gramene Genes)
GASR2
GA-stimulated transcript-related gene 2
gene from Oryza sativa PMID:16905871 Gramene
(via Gramene Genes)
HMG2
AT2G17370
protein from Arabidopsis thaliana PMID:7780305 TAIR GO
MAIN
AT1G17930
protein from Arabidopsis thaliana PMID:23607329 TAIR GO
NAP7
AT3G10670
protein from Arabidopsis thaliana PMID:15184673 TAIR GO
OBP1
AT3G50410
protein from Arabidopsis thaliana PMID:18665917 TAIR GO
PRMT4A
AT5G49020
protein from Arabidopsis thaliana PMID:18660432 TAIR GO
PRMT4B
AT3G06930
protein from Arabidopsis thaliana PMID:18660432 TAIR GO
RUS1
AT3G45890
protein from Arabidopsis thaliana PMID:19075229 TAIR GO
SKP2B
AT1G77000
protein from Arabidopsis thaliana PMID:22837358 TAIR GO
TPLATE
AT3G01780
protein from Arabidopsis thaliana PMID:17189342 TAIR GO
TPST
At1g08030
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TPST
AT1G08030
protein from Arabidopsis thaliana PMID:19666544 TAIR GO
URH1
AT2G36310
protein from Arabidopsis thaliana PMID:19293370 TAIR GO
WDR5a
AT3G49660
protein from Arabidopsis thaliana PMID:19567704 TAIR GO

lateral root apical meristem ; PO:0006020

A root apical meristem (PO:0020147) that gives rise to a lateral root (PO:0020121).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CLE16
AT2G01505
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CML23
AT1G66400
protein from Arabidopsis thaliana PMID:19517005 TAIR GO
CYP79B2
AT4G39950
protein from Arabidopsis thaliana PMID:15772288 TAIR GO
CYP79B3
AT2G22330
protein from Arabidopsis thaliana PMID:15772288 TAIR GO
GAMMA-H2AX
AT1G54690
protein from Arabidopsis thaliana PMID:16751347 TAIR GO
HMG
AT3G28730
protein from Arabidopsis thaliana PMID:15546350 TAIR GO
HTA13
AT3G20670
protein from Arabidopsis thaliana PMID:16751347 TAIR GO
HTA2
AT4G27230
protein from Arabidopsis thaliana PMID:16751347 TAIR GO
HTA6
AT5G59870
protein from Arabidopsis thaliana PMID:16751347 TAIR GO
HTA8
AT2G38810
protein from Arabidopsis thaliana PMID:16751347 TAIR GO
PCN
AT4G07410
protein from Arabidopsis thaliana PMID:22158464 TAIR GO
PLP3a
AT3G50960
protein from Arabidopsis thaliana PMID:18390592 TAIR GO
RHA2B
AT2G01150
protein from Arabidopsis thaliana PMID:12062802 TAIR GO
SPT16
AT4G10710
protein from Arabidopsis thaliana PMID:15546350 TAIR GO
UGE1
AT1G12780
protein from Arabidopsis thaliana PMID:16644739 TAIR GO
UGE2
AT4G23920
protein from Arabidopsis thaliana PMID:16644739 TAIR GO

primary root apical meristem ; PO:0006081

A root apical meristem (PO:0020147) that gives rise to a primary root (PO:0020127).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGL21
AT4G37940
protein from Arabidopsis thaliana PMID:11855641 TAIR GO
BRM
AT2G46020
protein from Arabidopsis thaliana PMID:15371304 TAIR GO
CLE17
AT1G70895
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CYP79B2
AT4G39950
protein from Arabidopsis thaliana PMID:15772288 TAIR GO
CYP79B3
AT2G22330
protein from Arabidopsis thaliana PMID:15772288 TAIR GO
DUR3
AT5G45380
protein from Arabidopsis thaliana PMID:17672841 TAIR GO
EIR1
AT5G57090
protein from Arabidopsis thaliana PMID:15635403 TAIR GO
GA2OX8
AT4G21200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
HMG
AT3G28730
protein from Arabidopsis thaliana PMID:15546350 TAIR GO
MGP
AT1G03840
protein from Arabidopsis thaliana PMID:16640459 TAIR GO
MYB56
AT5G17800
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAP
AT1G69490
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NUC
AT5G44160
protein from Arabidopsis thaliana PMID:16640459 TAIR GO
PAN
AT1G68640
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
PI
AT5G20240
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
PIN1
AT1G73590
protein from Arabidopsis thaliana PMID:15635403 TAIR GO
PIN3
AT1G70940
protein from Arabidopsis thaliana PMID:15635403 TAIR GO
PIN4
AT2G01420
protein from Arabidopsis thaliana PMID:15635403 TAIR GO
PIN7
AT1G23080
protein from Arabidopsis thaliana PMID:15635403 TAIR GO
PLP3a
AT3G50960
protein from Arabidopsis thaliana PMID:18390592 TAIR GO
RHA2B
AT2G01150
protein from Arabidopsis thaliana PMID:12062802 TAIR GO
SPT16
AT4G10710
protein from Arabidopsis thaliana PMID:15546350 TAIR GO
TEL1
AT3G26120
protein from Arabidopsis thaliana PMID:15356386 TAIR GO
TEL2
AT1G67770
protein from Arabidopsis thaliana PMID:15356386 TAIR GO
ULT2
AT2G20825
protein from Arabidopsis thaliana PMID:15673576 TAIR GO
XPL1
AT3G18000
protein from Arabidopsis thaliana PMID:15295103 TAIR GO

quiescent center ; PO:0020149

A portion of meristem tissue (PO:0009013) that is part of a root apical meristem (PO:0020147) and consists of mitotically and metabolically inactive cells and is located behind the protoderm (PO:0006210) of the root (PO:0009005).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABI4
AT2G40220
protein from Arabidopsis thaliana PMID:22312006 TAIR GO
AGL42
AT5G62165
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
AKN2
AT4G39940
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
ARF2
AT5G62000
protein from Arabidopsis thaliana PMID:21951467 TAIR GO
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
GL22
AT1G02335
protein from Arabidopsis thaliana PMID:22960910 TAIR
GLP5
AT1G09560
protein from Arabidopsis thaliana PMID:22960910 TAIR GO
HB-8
AT4G32880
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
IAA20
AT2G46990
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
IAA30
AT3G62100
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
LAP2
AT4G30920
protein from Arabidopsis thaliana PMID:21569035 TAIR GO
MCM2
AT1G44900
protein from Arabidopsis thaliana PMID:19650778 TAIR GO
MGT7
AT5G09690
protein from Arabidopsis thaliana PMID:19966073 TAIR GO
MYB56
AT5G17800
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAP
AT1G69490
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
PMID:16581911
PAN
AT1G68640
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
PMID:16581911
PHB
AT2G34710
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
PI
AT5G20240
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
PMID:16581911
PIN4
AT2G01420
protein from Arabidopsis thaliana PMID:15635403 TAIR GO
PLT1
At3g20840
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
RGF1
AT5G60810
protein from Arabidopsis thaliana PMID:20798316 TAIR GO
RPT2a
AT4G29040
protein from Arabidopsis thaliana PMID:15073153 TAIR GO
RVE1
AT5G17300
protein from Arabidopsis thaliana PMID:19805390 TAIR GO
SAUR41
AT1G16510
protein from Arabidopsis thaliana PMID:23396598 TAIR GO
SCR
AT3G54220
protein from Arabidopsis thaliana PMID:17656722 TAIR GO
SGP1
AT5G54840
protein from Arabidopsis thaliana PMID:19123141 TAIR GO
TAA1
AT1G70560
protein from Arabidopsis thaliana PMID:18394996 TAIR GO
PMID:18394997
WIP4
AT3G20880
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
PMID:16581911
WOX5
AT3G11260
protein from Arabidopsis thaliana PMID:14711878 TAIR GO
YUC8
AT4G28720
protein from Arabidopsis thaliana PMID:19805390 TAIR GO

root initial cell ; PO:0000059

An initial cell that is part of a root apical meristem and by division gives rise to two cells, one of which remains in the meristem, while the other is produces different root cells.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
MCM2
AT1G44900
protein from Arabidopsis thaliana PMID:19650778 TAIR GO
RPT2a
AT4G29040
protein from Arabidopsis thaliana PMID:15073153 TAIR GO

columella root cap initial cell ; PO:0020133

A root initial cell that produces columella cells in the root cap. In direct contact with quiescent center.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ARF2
AT5G62000
protein from Arabidopsis thaliana PMID:21951467 TAIR GO
FEZ
AT1G26870
protein from Arabidopsis thaliana PMID:19081078 TAIR GO
MAPKKK7
AT3G13530
protein from Arabidopsis thaliana PMID:19123141 TAIR GO
RGF1
AT5G60810
protein from Arabidopsis thaliana PMID:20798316 TAIR GO

columella root cap cell ; PO:0020132

Cell that constitutes the central part of the root cap, arranged in longitudinal files.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
DOT2
DEFECTIVELY ORGANIZED TRIBUTARIES 2
protein from Arabidopsis thaliana PMID:19000164 TAIR
IAA20
AT2G46990
protein from Arabidopsis thaliana PMID:15937229 TAIR GO
IDL1
AT3G25655
protein from Arabidopsis thaliana PMID:18660431 TAIR GO
MAPKKK7
AT3G13530
protein from Arabidopsis thaliana PMID:19123141 TAIR GO
MIZ1
AT2G41660
protein from Arabidopsis thaliana PMID:17360591 TAIR GO
NAC015
AT1G33280
protein from Arabidopsis thaliana PMID:20197506 TAIR GO
NAC070
AT4G10350
protein from Arabidopsis thaliana PMID:20197506 TAIR GO
PC-MYB1
AT4G32730
protein from Arabidopsis thaliana PMID:17287251 TAIR GO
RABA2b
AT1G07410
protein from Arabidopsis thaliana PMID:18239134 TAIR GO
ROP2
AT1G20090
protein from Arabidopsis thaliana PMID:16141452 TAIR GO
UGE3
AT1G63180
protein from Arabidopsis thaliana PMID:14973160 TAIR GO

lateral root-cap epidermal initial cell ; PO:0000061

A root initial cell that produces lateral root-cap cells and root epidermis.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
MYB66
AT5G14750
protein from Arabidopsis thaliana PMID:16640459 TAIR GO

root cortex-endodermis initial cell ; PO:0000060

A root initial cell that produces root cortex and endodermis. In direct contact with quiescent center.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
FON1
FLORAL ORGAN NUMBER 1
gene from Oryza sativa PMID:12974810 Gramene
(via Gramene Genes)
MGP
AT1G03840
protein from Arabidopsis thaliana PMID:17785527 TAIR GO
SAUR41
AT1G16510
protein from Arabidopsis thaliana PMID:23396598 TAIR GO
WOX7
AT5G05770
protein from Arabidopsis thaliana PMID:21951467 TAIR GO

root procambium ; PO:0006307

A portion of procambium (PO:0025275) tissue that undergoes differentiation to form the primary vascular tissue (PO:0025408) of a root (PO:0009005).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGL21
AT4G37940
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CVP2
AT1G05470
protein from Arabidopsis thaliana PMID:15100402 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:17565617 TAIR GO
NAC083
AT5G13180
protein from Arabidopsis thaliana PMID:20388856 TAIR GO
RR5
AT3G48100
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
WOL
AT2G01830
protein from Arabidopsis thaliana PMID:16357038 TAIR GO

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