phloem

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Annotations to phloem ; PO:0005417 and its children

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phloem ; PO:0005417

A portion of vascular tissue (PO:0009015) that has as parts sieve elements (PO:0025406).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCB11
AT1G02520
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCB15
AT3G28345
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ALDH11A3
AT2G24270
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
ALS3
AT2G37330
protein from Arabidopsis thaliana PMID:15659095 TAIR GO
PMID:18485061
AT1G03220.1
AT1G03220
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT1G33600.1
AT1G33600
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT1G33610.1
AT1G33610
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT1G78850.1
AT1G78850
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT2G03500.1
AT2G03500
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
AT2G28810.1
AT2G28810
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
AT3G43430.1
AT3G43430
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
BZIP9
AT5G24800
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
C
CHROMOGEN FOR ANTHOCYANIN
gene from Oryza sativa PMID:15255870 Gramene
(via Gramene Genes)
CalS7
AT1G06490
protein from Arabidopsis thaliana PMID:21175885 TAIR GO
CAT3
AT1G20620
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
CCH
AT3G56240
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
CLV1
AT1G75820
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
CPC
AT2G46410
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
DAG1
AT3G61850
protein from Arabidopsis thaliana PMID:11842145 TAIR GO
DAR2
AT2G39830
protein from Arabidopsis thaliana PMID:21749503 TAIR GO
DELTA-TIP
AT3G16240
protein from Arabidopsis thaliana PMID:8624437 TAIR GO
DHAR1
AT1G19570
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
FTIP1
AT5G06850
protein from Arabidopsis thaliana PMID:22529749 TAIR GO
GATL10
AT3G28340
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL3
AT1G13250
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL6
AT4G02130
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL7
AT3G62660
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GER3
AT5G20630
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GGT1
AT4G39640
protein from Arabidopsis thaliana PMID:17316175 TAIR GO
GSTF10
AT2G30870
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GSTF2
AT4G02520
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GSTF3
AT2G02930
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GSTF9
AT2G30860
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
PMID:20442276
GSTU19
AT1G78380
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GUT1
AT5G61840
protein from Arabidopsis thaliana PMID:18980662 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
HKT1
AT4G10310
protein from Arabidopsis thaliana PMID:12727868 TAIR GO
HOG1
AT4G13940
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
INT4
AT4G16480
protein from Arabidopsis thaliana PMID:16603666 TAIR GO
IPL3
INHIBITOR FOR PURPLE LEAF 3
gene from Oryza sativa PMID:16926158 Gramene
(via Gramene Genes)
ISI1
AT4G27750
protein from Arabidopsis thaliana TAIR:Publication:501713883 TAIR GO
PMID:16805736
KAN
AT5G16560
protein from Arabidopsis thaliana PMID:14561401 TAIR GO
KNAT4
AT5G11060
protein from Arabidopsis thaliana PMID:19704797 TAIR GO
KT2/3
AT4G22200
protein from Arabidopsis thaliana PMID:10377458 TAIR GO
PMID:18485061
LGT9
AT1G24170
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
LOS2
AT2G36530
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
mtLPD1
AT1G48030
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
mtLPD2
AT3G17240
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
MYR1
AT5G18240
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
MYR2
AT3G04030
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC082
AT5G09330
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
NIP6;1
AT1G80760
protein from Arabidopsis thaliana PMID:18952773 TAIR GO
NPF1.2
AT1G52190
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NPF2.13
AT1G69870
protein from Arabidopsis thaliana PMID:19734434 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
NRT1.12
AT3G16180
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NTHK1
ethylene receptor homolog
gene from Nicotiana PMID:12154144 SGN
(via SGN Genes)
OBP2
AT1G07640
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
OPT3
AT4G16370
protein from Arabidopsis thaliana PMID:24867923 TAIR GO
PGR5
AT2G05620
protein from Arabidopsis thaliana PMID:18663471 TAIR GO
PN
PURPLE NODE
gene from Oryza sativa PMID:16263903 Gramene
(via Gramene Genes)
PP2-A1
AT4G19840
protein from Arabidopsis thaliana PMID:12529520 TAIR GO
PMID:20442276
PP2-A2
AT4G19850
protein from Arabidopsis thaliana PMID:12529520 TAIR GO
PMID:20442276
PROT1
AT2G39890
protein from Arabidopsis thaliana PMID:15618414 TAIR GO
QUA1
AT3G25140
protein from Arabidopsis thaliana PMID:16059719 TAIR GO
ROC3
AT2G16600
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
SAHH2
AT3G23810
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
sks5
AT1G76160
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
SKS6
AT1G41830
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
SUC2
AT1G22710
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
PMID:7647685
SUT4
AT1G09960
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
SWEET11
AT3G48740
protein from Arabidopsis thaliana PMID:22157085 TAIR GO
SWEET12
AT5G23660
protein from Arabidopsis thaliana PMID:22157085 TAIR GO
TGG1
AT5G26000
protein from Arabidopsis thaliana PMID:16640593 TAIR GO
TGG2
AT5G25980
protein from Arabidopsis thaliana PMID:16640593 TAIR GO
TMO6
AT5G60200
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
TPX1
AT1G65980
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
TSF
AT4G20370
protein from Arabidopsis thaliana PMID:15951566 TAIR GO
UBC30
AT5G56150
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
UGP1
AT3G03250
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
UGP2
AT5G17310
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
VOZ1
AT1G28520
protein from Arabidopsis thaliana PMID:15295067 TAIR GO
WNK8
AT5G41990
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
WRKY18
AT4G31800
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO

companion cell ; PO:0000071

A parenchyma cell (PO:0000074) that is adjacent to a sieve tube element (PO:0000289) and arises from the same phloem mother cell (PO:0000400) as the sieve tube element.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ADG1
AT5G48300
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL1
AT5G19220
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL2
AT1G27680
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL3
AT4G39210
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APS2
AT1G05610
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
AT2G28810.1
AT2G28810
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
FT
AT1G65480
protein from Arabidopsis thaliana PMID:17540570 TAIR GO
FTIP1
AT5G06850
protein from Arabidopsis thaliana PMID:22529749 TAIR GO
GDH1
AT5G18170
protein from Arabidopsis thaliana PMID:16418233 TAIR GO
GDH2
AT5G07440
protein from Arabidopsis thaliana PMID:16418233 TAIR GO
HA3
AT5G57350
protein from Arabidopsis thaliana PMID:8718619 TAIR GO
MADS22 gene from Oryza sativa PMID:16926158 Gramene
(via Gramene Genes)
NAKR1
AT5G02600
protein from Arabidopsis thaliana PMID:21193571 TAIR GO
NPF2.9
AT1G18880
protein from Arabidopsis thaliana PMID:21571952 TAIR GO
ORC2
Origin recognition complex subunit 2
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
PNH1
PINHEAD 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
RCN1
Putative phosphatidylethanolamine-binding protein
gene from Oryza sativa PMID:15255870 Gramene
(via Gramene Genes)
RCN2
Putative phosphatidylethanolamine-binding protein
gene from Oryza sativa PMID:18034312 Gramene
(via Gramene Genes)

protophloem ; PO:0006077

A portion of primary phloem (PO:0006075) tissue has as parts the first-formed sieve elements (PO:0025406) at a particular location and does not have companion cells (PO:0000071, in angiosperms) or albuminous cells (PO:0025412, in gymnosperms) associated with the sieve elements.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
APL
AT1G79430
protein from Arabidopsis thaliana PMID:14614507 TAIR GO
AUX1
AT2G38120
protein from Arabidopsis thaliana PMID:11641271 TAIR GO
PMID:16690816
GATA20
AT2G18380
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAC083
AT5G13180
protein from Arabidopsis thaliana PMID:20388856 TAIR GO

phloem mother cell ; PO:0000400

A cambial initial cell (PO:0000295) which is destined to differentiate into secondary phloem.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
DOF2.4
AT2G37590
protein from Arabidopsis thaliana PMID:16581911 TAIR GO

sieve tube element ; PO:0000289

A sieve element (PO:0025406) that is part of a sieve tube (PO:0025416) and has as parts sieve areas aggregated into sieve plates (GO:0097218).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
RTM1
AT1G05760
protein from Arabidopsis thaliana PMID:11743111 TAIR GO
RTM2
AT5G04890
protein from Arabidopsis thaliana PMID:11743111 TAIR GO
SEOa
AT3G01670
protein from Arabidopsis thaliana PMID:20932300 TAIR GO
SEOR1
AT3G01680
protein from Arabidopsis thaliana PMID:20932300 TAIR GO
SUT2
AT2G02860
protein from Arabidopsis thaliana PMID:14739351 TAIR GO
sut4
sucrose transporter 4
gene from Solanum lycopersicum PMID:10948254 SGN
(via SGN Genes)
GO

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