vascular system

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Annotations to vascular system ; PO:0000034 and its children

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xylem ; PO:0005352

A portion of vascular tissue (PO:0009015) that has as part one or more tracheary elements (PO:0000290).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
N105
gapped xylem (gpx) mutant
germplasm from Arabidopsis thaliana NASC:N105 NASC
N18
IRREGULAR XYLEM1
germplasm from Arabidopsis thaliana NASC:N18 NASC
N19
IRREGULAR XYLEM4
germplasm from Arabidopsis thaliana NASC:N19 NASC
NAC005
AT1G02250
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC076
AT4G36160
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NPF7.2
AT4G21680
protein from Arabidopsis thaliana PMID:20501909 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
PGLP2
AT5G47760
protein from Arabidopsis thaliana PMID:17478634 TAIR GO
PMT1
AT2G16120
protein from Arabidopsis thaliana PMID:19969532 TAIR GO
PMT2
AT2G16130
protein from Arabidopsis thaliana PMID:19969532 TAIR GO
RAC10
AT5G62880
protein from Arabidopsis thaliana PMID:22984069 TAIR GO
ROPGAP3
AT2G46710
protein from Arabidopsis thaliana PMID:22984069 TAIR GO
ROPGEF4
AT2G45890
protein from Arabidopsis thaliana PMID:22984069 TAIR GO
RWA1
AT5G46340
protein from Arabidopsis thaliana PMID:21673009 TAIR GO
RWA2
AT3G06550
protein from Arabidopsis thaliana PMID:21673009 TAIR GO
RWA3
AT2G34410
protein from Arabidopsis thaliana PMID:21673009 TAIR
RWA4
AT1G29890
protein from Arabidopsis thaliana PMID:21673009 TAIR
SWEET17
AT4G15920
protein from Arabidopsis thaliana PMID:23583552 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
WOX4
At1g46480
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
XND1
AT5G64530
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
ZFWD1
AT4G25440
protein from Arabidopsis thaliana PMID:15923329 TAIR GO

primary xylem ; PO:0005849

A portion of xylem (PO:0005352) tissue that develops from the procambium (PO:0025275).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
IRX9
AT2G37090
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
LGT9
AT1G24170
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
NAC007
AT1G12260
protein from Arabidopsis thaliana PMID:16103214 TAIR GO

metaxylem ; PO:0000372

A portion of primary xylem (PO:0005849) tissue that has as part one or more metaxylem tracheary elements (PO:0025576) embedded in parenchyma (PO:0005421) tissue and may contain xylem fiber cells (PO:0000274).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G28140.1
AT4G28140
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
GATL2
AT3G50760
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL5
AT1G02720
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MYB46
AT5G12870
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:17114348 TAIR GO
NAC101
AT5G62380
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO

protoxylem ; PO:0000272

A portion of primary xylem (PO:0000272) tissue that has as part one or more protoxylem tracheary elements (PO:0025575) embedded in parenchyma (PO:0005421) tissue.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G28140.1
AT4G28140
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
BHLH32
AT3G25710
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
FOR1
floral organ regulator 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
HP6
AT1G80100
protein from Arabidopsis thaliana PMID:16400151 TAIR GO
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
LGT8
AT1G70090
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MADS22 gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
MYB46
AT5G12870
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
PMID:20388856

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