sporophyte development stage

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Annotations to sporophyte development stage ; PO:0028002 and its children

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xylem ; PO:0005352

A portion of vascular tissue (PO:0009015) that has as part one or more tracheary elements (PO:0000290).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB52
AT1G17950
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB54
AT1G73410
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB58
AT1G16490
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB63
AT1G79180
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB69
AT4G33450
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
WOX4
At1g46480
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
XND1
AT5G64530
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
ZFWD1
AT4G25440
protein from Arabidopsis thaliana PMID:15923329 TAIR GO

primary xylem ; PO:0005849

A portion of xylem (PO:0005352) tissue that develops from the procambium (PO:0025275).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
IRX9
AT2G37090
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
LGT9
AT1G24170
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
NAC007
AT1G12260
protein from Arabidopsis thaliana PMID:16103214 TAIR GO

metaxylem ; PO:0000372

A portion of primary xylem (PO:0005849) tissue that has as part one or more metaxylem tracheary elements (PO:0025576) embedded in parenchyma (PO:0005421) tissue and may contain xylem fiber cells (PO:0000274).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G28140.1
AT4G28140
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
GATL2
AT3G50760
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL5
AT1G02720
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MYB46
AT5G12870
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:17114348 TAIR GO
NAC101
AT5G62380
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO

protoxylem ; PO:0000272

A portion of primary xylem (PO:0000272) tissue that has as part one or more protoxylem tracheary elements (PO:0025575) embedded in parenchyma (PO:0005421) tissue.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G28140.1
AT4G28140
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
BHLH32
AT3G25710
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
FOR1
floral organ regulator 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
HP6
AT1G80100
protein from Arabidopsis thaliana PMID:16400151 TAIR GO
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
LGT8
AT1G70090
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MADS22 gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
MYB46
AT5G12870
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
MYB52
AT1G17950
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB54
AT1G73410
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB58
AT1G16490
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB63
AT1G79180
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB69
AT4G33450
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC083
AT5G13180
protein from Arabidopsis thaliana PMID:20388856 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
PMID:20388856
YAB1
YABBY1
gene from Oryza sativa PMID:18034312 Gramene
(via Gramene Genes)

tracheary element ; PO:0000290

A native plant cell (PO:0025606) that has a lignified cell wall with secondary thickening and bordered pits.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ADK1
AT3G09820
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
ADK2
AT5G03300
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
AT5G51890.1
AT5G51890
protein from Arabidopsis thaliana PMID:16446311 TAIR GO
HOG1
AT4G13940
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
JLO
AT4G00220
protein from Arabidopsis thaliana PMID:19088331 TAIR GO
LBD18
AT2G45420
protein from Arabidopsis thaliana PMID:19088331 TAIR GO
SAHH2
AT3G23810
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
XCP1
AT4G35350
protein from Arabidopsis thaliana PMID:11788755 TAIR GO
PMID:11788755
XCP2
AT1G20850
protein from Arabidopsis thaliana PMID:18573193 TAIR GO

tracheid ; PO:0000301

A tracheary element (PO:0000290) that has no perforations in its cell wall.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
px1
class III peroxidase encoding gene 1
gene from Picea abies PMID:16897487 POC:Ramona Walls
(via NCBI gi)

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