cardinal part of multi-tissue plant structure

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Annotations to cardinal part of multi-tissue plant structure ; PO:0025498 and its children

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portion of transmitting tissue ; PO:0020102

A portion of ground tissue in the style of a carpel through which a pollen tube grows; it connects a stigma and the inside of an ovary.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ARF8
AT5G37020
protein from Arabidopsis thaliana PMID:17021043 TAIR GO
BLH1
AT2G35940
protein from Arabidopsis thaliana PMID:18055603 TAIR GO
BLH2
AT4G36870
protein from Arabidopsis thaliana PMID:17873098 TAIR GO
BLH4
AT2G23760
protein from Arabidopsis thaliana PMID:17873098 TAIR GO
CLE1
AT1G73165
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE17
AT1G70895
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE5
AT2G31083
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
GRP2
AT4G38680
protein from Arabidopsis thaliana PMID:17963727 TAIR GO
HEC1
AT5G67060
protein from Arabidopsis thaliana PMID:17855426 TAIR GO
HEC2
AT3G50330
protein from Arabidopsis thaliana PMID:17855426 TAIR GO
HEC3
AT5G09750
protein from Arabidopsis thaliana PMID:17855426 TAIR GO
NTT
AT3G57670
protein from Arabidopsis thaliana PMID:17600712 TAIR GO

transition zone ; PO:0003000

A region of the root between the meristem and the region of rapid elongation in which isodiametric growth (cell expansion) occurs.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
HB5
AT5G65310
protein from Arabidopsis thaliana PMID:12678559 TAIR GO
KNAT5
AT4G32040
protein from Arabidopsis thaliana PMID:16463096 TAIR GO
RR1
AT3G16857
protein from Arabidopsis thaliana PMID:17363254 TAIR GO
RR12
AT2G25180
protein from Arabidopsis thaliana PMID:17363254 TAIR GO
TIP2;2
AT4G17340
protein from Arabidopsis thaliana PMID:19922653 TAIR GO
TIP2;3
AT5G47450
protein from Arabidopsis thaliana PMID:19922653 TAIR GO

valve ; PO:0025228

A cardinal organ part that is a part of a plant structure that splits apart when the structure dehisces.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
BOP1
AT3G57130
protein from Arabidopsis thaliana PMID:22114095 TAIR GO
BOP2
AT2G41370
protein from Arabidopsis thaliana PMID:22114095 TAIR GO

fruit valve ; PO:0000033

A valve that is a part of a fruit that splits apart when the fruit dehisces.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ANAC043
At2g46770
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
APY7
AT4G19180
protein from Arabidopsis thaliana PMID:23728389 TAIR
ASK2
AT5G42190
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
AT1G77200.1
AT1G77200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G22760.1
AT2G22760
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC12
AT5G05390
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
SK11
AT4G34210
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK15
AT3G25650
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK19
AT2G03160
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK3
AT2G25700
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK4
AT1G20140
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK9
AT3G21850
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SKP1
AT1G75950
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
VSP1
AT5G24780
protein from Arabidopsis thaliana PMID:9747802 TAIR GO

fruit distal end ; PO:0008001

A cardinal part of multi-tissue plant structure (PO:0025498) that is the end of a fruit (PO:0009001) distal from a fruit pedicel (PO:0004536).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
RGXT3
AT1G56550
protein from Arabidopsis thaliana PMID:18755189 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO

silk scar ; PO:0002004

The silk scar is composed of the shrivelled remains of the intercalary region of the silk, together with the base of the silk which is the true stylar tissue of the silk arising from the distal end of the developing kernel (caryopsis).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
5805F
5805F red-silk-scar*-MTC
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)

fruit proximal end ; PO:0008002

A cardinal part of multi-tissue plant structure (PO:0025498) that is the end of a fruit (PO:0009001) proximal to a fruit pedicel (PO:0004536).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CHAL
AT2G30370
protein from Arabidopsis thaliana PMID:20056678 TAIR GO
RGXT3
AT1G56550
protein from Arabidopsis thaliana PMID:18755189 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO

hilum ; PO:0020063

A cardinal part of multi-tissue plant structure (PO:0025498) that is a scar on a seed (PO:0009010) at the place where it was attached to a funicle (PO:0020006).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to

Glyma09g36983
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)
RR22
AT3G04280
protein from Arabidopsis thaliana PMID:17099079 TAIR GO
T
Glyma06g21920
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)

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