seed coat

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seed coat ; PO:0009088

A portion of plant tissue that is the covering of a seed derived from ovular - mainly integumentary - tissue.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to

Glyma09g36983
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)
ABI3
AT3G24650
protein from Arabidopsis thaliana PMID:16844907 TAIR GO
ACT7
AT5G09810
protein from Arabidopsis thaliana PMID:8754679 TAIR GO
AHA10
AT1G17260
protein from Arabidopsis thaliana PMID:15695592 TAIR GO
ANR1
Glyma08g06630
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)
BAN
At1g61720
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
BF
BROWN FURROWS OF HULL
gene from Oryza sativa GR ref:2298 Gramene
(via Gramene Genes)
BHA
BLACK HULL A
gene from Oryza sativa GR ref:2298 Gramene
(via Gramene Genes)
BHB
BLACK HULL B
gene from Oryza sativa GR ref:2298 Gramene
(via Gramene Genes)
BHC
BLACK HULL C
gene from Oryza sativa GR ref:3024 Gramene
(via Gramene Genes)
BL1
BROWN LEAF SPOT 1
gene from Oryza sativa GR ref:1793 Gramene
(via Gramene Genes)
BL2
BROWN LEAF SPOT 2
gene from Oryza sativa GR ref:6242 Gramene
(via Gramene Genes)
BL3
BROWN LEAF SPOT 3
gene from Oryza sativa GR ref:5883 Gramene
(via Gramene Genes)
CSLA02
AT5G22740
protein from Arabidopsis thaliana PMID:24569843 TAIR GO
DP1
AT4G11180
protein from Arabidopsis thaliana PMID:23115000 TAIR GO
FAR1
AT5G22500
protein from Arabidopsis thaliana PMID:20571114 TAIR GO
FAR1
At5g22500
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
FAR4
At3g44540
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
FAR4
AT3G44540
protein from Arabidopsis thaliana PMID:20571114 TAIR GO
FAR5
At3g44550
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
FAR5
AT3G44550
protein from Arabidopsis thaliana PMID:20571114 TAIR GO
FFT
At4g25640
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
GF1
GOLD FURROWS OF HULL 1
gene from Oryza sativa GR ref:6242 Gramene
(via Gramene Genes)
GF2
GOLD FURROWS OF HULL 2
gene from Oryza sativa GR ref:2434 Gramene
(via Gramene Genes)
GIF1
GRAIN INCOMPLETE FILLING 1
gene from Oryza sativa PMID:10809440 Gramene
(via Gramene Genes)
GmAS1-A
Glyma11g27480
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)
GmASPGB1-A
Glyma14g09510
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)
GPAT5
AT3G11430
protein from Arabidopsis thaliana PMID:17259262 TAIR GO
HG
HAIRY GLUME
gene from Oryza sativa GR ref:3872 Gramene
(via Gramene Genes)
IBF
INHIBITOR FOR BROWN FURROWS
gene from Oryza sativa GR ref:3024 Gramene
(via Gramene Genes)
IPL4
INHIBITOR FOR PURPLE PERICARP 4
gene from Oryza sativa GR ref:6056 Gramene
(via Gramene Genes)
LAC3
AT2G30210
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
MUM2
AT5G63800
protein from Arabidopsis thaliana PMID:18165329 TAIR GO
MYB5
At3g13540
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
N3903
George Haughn
germplasm from Arabidopsis thaliana NASC:N3903 NASC
N3904
George Haughn
germplasm from Arabidopsis thaliana NASC:N3904 NASC
N3905
George Haughn
germplasm from Arabidopsis thaliana NASC:N3905 NASC
N3906
George Haughn
germplasm from Arabidopsis thaliana NASC:N3906 NASC
N3909
George Haughn
germplasm from Arabidopsis thaliana NASC:N3909 NASC
NIC2
At5g23230
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
OEP16-1
AT2G28900
protein from Arabidopsis thaliana PMID:22155670 TAIR GO
PH
PHENOL STAINING
gene from Oryza sativa GR ref:3898 Gramene
(via Gramene Genes)
PMT5
AT3G18830
protein from Arabidopsis thaliana PMID:15525644 TAIR GO
PR
PURPLE HULL
gene from Oryza sativa GR ref:5814 Gramene
(via Gramene Genes)
PRPA
PURPLE PERICARP A
gene from Oryza sativa GR ref:5328 Gramene
(via Gramene Genes)
PRPB
PURPLE PERICARP B
gene from Oryza sativa GR ref:3872 Gramene
(via Gramene Genes)
RA
TRANSCRIPTIONAL ACTIVATOR A
gene from Oryza sativa PMID:8849907 Gramene
(via Gramene Genes)
RB
TRANSCRIPTIONAL ACTIVATOR B
gene from Oryza sativa GR ref:5666 Gramene
(via Gramene Genes)
RC
BROWN PERICARP AND SEED COAT
gene from Oryza sativa GR ref:6242 Gramene
(via Gramene Genes)
RD
RED PERICARP AND SEED COAT
gene from Oryza sativa GR ref:3024 Gramene
(via Gramene Genes)
RWP1
AT5G41040
protein from Arabidopsis thaliana PMID:19759341 TAIR GO
SK15
AT3G25650
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK19
AT2G03160
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK3
AT2G25700
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
SK9
AT3G21850
protein from Arabidopsis thaliana PMID:12970487 TAIR GO
ST2
STRIPE 2
gene from Oryza sativa GR ref:5666 Gramene
(via Gramene Genes)
SUS2
AT5G49190
protein from Arabidopsis thaliana PMID:18701523 TAIR GO
TCH2
AT5G37770
protein from Arabidopsis thaliana PMID:16113225 TAIR GO
TT1
At1g34790
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT10
At5g48100
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:16779554 TAIR GO
PMID:21063888
TT12
At3g59030
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT12
AT3G59030
protein from Arabidopsis thaliana PMID:17601828 TAIR GO
TT16
At5g23260
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT19
At5g17220
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT2
At5g35550
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT3
At5g42800
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT4
At5g13930
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT5
At3g55120
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT6
At3g51240
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT7
At5g07990
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TT8
At4g09820
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TTG1
At5g24520
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TTG2
At2g37260
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
UGT80B1
At1g43620
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
WH
WHITE HULL
gene from Oryza sativa GR ref:1794 Gramene
(via Gramene Genes)
Wp
Glyma02g05450
gene from Glycine max PMID:25774204 POC:Ethan Johnson
(via SOY gene)

seed coat epidermis ; PO:0006048

A portion of epidermis that is part of a seed coat.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CESA5
AT5G09870
protein from Arabidopsis thaliana PMID:21705653 TAIR GO
FLY1
AT4G28370
protein from Arabidopsis thaliana PMID:23482858 TAIR GO
N3907
George Haughn
germplasm from Arabidopsis thaliana NASC:N3907 NASC
N3908
George Haughn
germplasm from Arabidopsis thaliana NASC:N3908 NASC
PMEI6
AT2G47670
protein from Arabidopsis thaliana PMID:23362209 TAIR GO
RGP4
AT5G50750
protein from Arabidopsis thaliana PMID:21478444 TAIR GO

seed trichome ; PO:0004511

A trichome that develops from seed coat epidermis.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ACY
Acyltransferase-like protein
protein from Gossypium hirsutum PMID:17506877 AgBase
B1NHU0
Aquaporin PIP1-2
protein from Gossypium hirsutum PMID:18392624 AgBase
B1NHU1
Aquaporin PIP1-2
protein from Gossypium hirsutum PMID:18392624 AgBase
BTub1
Beta-tubulin1
protein from Gossypium hirsutum PMID:18596112 AgBase
CSD2a
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD2b
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD3
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD3s
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CTL1
Chitinase-like protein
protein from Gossypium hirsutum PMID:15284492 AgBase
CTL2
Chitinase-like protein
protein from Gossypium hirsutum PMID:15284492 AgBase
CVA69.24
V-type proton ATPase catalytic subunit A
protein from Gossypium hirsutum PMID:9536073 AgBase
FDH
Fiddlehead-like protein
protein from Gossypium hirsutum PMID:17506877 AgBase
FSltp1
Non-specific lipid-transfer protein
protein from Gossypium hirsutum PMID:10634943 AgBase
FSltp2
Non-specific lipid-transfer protein
protein from Gossypium hirsutum PMID:10634943 AgBase
FSltp3
Non-specific lipid-transfer protein
protein from Gossypium hirsutum PMID:10634943 AgBase
FSltp4
Lipid transfer protein
protein from Gossypium hirsutum PMID:17715150 AgBase
G1JRK6
Sucrose synthase isoform C
protein from Gossypium hirsutum PMID:21757635 AgBase
GhATPD1
ATP synthase delta subunit 1
protein from Gossypium hirsutum PMID:10394903 AgBase
GhCSD1
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
GhFAnnx
Annexin
protein from Gossypium hirsutum PMID:19885739 AgBase
GhTUB1
Beta tubulin 1
protein from Gossypium hirsutum PMID:17506877 AgBase
GhTUB1
Tubulin beta-1
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB10
Beta-tubulin 10
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB12
Tubulin
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB4
Beta-tubulin 4
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB5
Tubulin beta-5 chain
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB8
Beta-tubulin 8
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB9
Tubulin beta-3 chain
protein from Gossypium hirsutum PMID:18596112 AgBase
GhVIN1
Vacuolar invertase
protein from Gossypium hirsutum PMID:20699399 AgBase
Glp1
Fiber protein GLP2
protein from Gossypium hirsutum PMID:14648117 AgBase
MIP
Delta-TIP homolog
protein from Gossypium hirsutum PMID:9536073 AgBase
MYB1 protein from Gossypium hirsutum PMID:10394903 AgBase
myb109
Transcription factor myb109
protein from Gossypium hirsutum PMID:14580676 AgBase
MYB109
Myb family transcription factor 109
protein from Gossypium hirsutum PMID:17506877 AgBase
MYB2
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:17506877 AgBase
MYB3
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:10394903 AgBase
MYB6
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:10394903 AgBase
O82090
Annexin
protein from Gossypium hirsutum PMID:10069831 AgBase
PEPC1
Phosphoenolpyruvate carboxylase 1
protein from Gossypium hirsutum PMID:9536073 AgBase
PEPC2
Phosphoenolpyruvate carboxylase
protein from Gossypium hirsutum PMID:19815688 AgBase
PMA
Plasma membrane H+-ATPase
protein from Gossypium hirsutum PMID:9536073 AgBase
SCP
Putative serine carboxypeptidase
protein from Gossypium hirsutum PMID:17506877 AgBase
TUA10
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA11
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA5
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA6
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA7
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA8
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA9
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUBA
Alpha-tubulin
protein from Gossypium hirsutum PMID:9536073 AgBase
UBC1
Ubiquitin-conjugating enzyme E2
protein from Gossypium hirsutum PMID:12591614 AgBase
UBC2
Ubiquitin-conjugating enzyme E2
protein from Gossypium hirsutum PMID:12591614 AgBase
VacInv1
Vacuolar invertase 1
protein from Gossypium hirsutum PMID:20300865 AgBase
vacInv2
Vacuolar invertase 2
protein from Gossypium hirsutum PMID:20300865 AgBase
VPP
H+-pyrophosphatase
protein from Gossypium hirsutum PMID:9536073 AgBase

seed trichome development stage ; PO:0025369

A trichome development stage that has as primary participant a seed trichome.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
BTub1
Beta-tubulin1
protein from Gossypium hirsutum PMID:18596112 AgBase
CSD2a
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD2b
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD3
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD3s
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
G1JRK6
Sucrose synthase isoform C
protein from Gossypium hirsutum PMID:21757635 AgBase
GhATPD1
ATP synthase delta subunit 1
protein from Gossypium hirsutum PMID:10394903 AgBase
GhCSD1
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
GhFAnnx
Annexin
protein from Gossypium hirsutum PMID:19885739 AgBase
GhGlcAT1
Glycuronosyltransferase-like protein
protein from Gossypium hirsutum PMID:15940874 AgBase
GhSuSy
Sucrose synthase
protein from Gossypium hirsutum PMID:9765525 AgBase
GhTUB1
Tubulin beta-1
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB10
Beta-tubulin 10
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB12
Tubulin
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB4
Beta-tubulin 4
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB5
Tubulin beta-5 chain
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB8
Beta-tubulin 8
protein from Gossypium hirsutum PMID:18596112 AgBase
GhTUB9
Tubulin beta-3 chain
protein from Gossypium hirsutum PMID:18596112 AgBase
GhVIN1
Vacuolar invertase
protein from Gossypium hirsutum PMID:20699399 AgBase
MYB1 protein from Gossypium hirsutum PMID:10394903 AgBase
myb109
Transcription factor myb109
protein from Gossypium hirsutum PMID:14580676 AgBase
MYB2
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:10394903 AgBase
MYB3
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:10394903 AgBase
MYB6
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:10394903 AgBase
O82090
Annexin
protein from Gossypium hirsutum PMID:10069831 AgBase
Q39777
Putative uncharacterized protein
protein from Gossypium hirsutum PMID:7770543 AgBase
TUA10
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA11
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA5
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA6
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA7
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA8
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase
TUA9
Alpha-tubulin
protein from Gossypium hirsutum PMID:17761728 AgBase

seed trichome elongation stage ; PO:0025371

A seed trichome development stage which occurs during the interval between the onset of seed trichome elongation and the onset of seed trichome secondary wall biosynthesis.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
A3F7Q2
Benzoquinone reductase
protein from Gossypium hirsutum PMID:18534861 AgBase
A3F7Q3
Benzoquinone reductase
protein from Gossypium hirsutum PMID:18534861 AgBase
A6MUS5
Beta-tubulin 1
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUS6
Ubiquitin conjugating enzyme
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUS7
Acetyl CoA carboxylase
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUS8
Beta-tubulin 2
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUT1
Annexin
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUT3
Actin
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUT4
GDP-mannose pyrophosphorylase
protein from Gossypium hirsutum PMID:18043952 AgBase
A6MUT5
Cellulose synthase
protein from Gossypium hirsutum PMID:18043952 AgBase
ACT1
Actin
protein from Gossypium hirsutum PMID:15722467 AgBase
B1NHU0
Aquaporin PIP1-2
protein from Gossypium hirsutum PMID:18392624 AgBase
B1NHU1
Aquaporin PIP1-2
protein from Gossypium hirsutum PMID:18392624 AgBase
BCP1
Copper binding protein 1
protein from Gossypium hirsutum PMID:21029107 AgBase
BCP2
Copper binding protein 2
protein from Gossypium hirsutum PMID:21029107 AgBase
BCP3
Copper binding protein 3
protein from Gossypium hirsutum PMID:21029107 AgBase
BCP4
Copper binding protein 4
protein from Gossypium hirsutum PMID:21029107 AgBase
CVA69.24
V-type proton ATPase catalytic subunit A
protein from Gossypium hirsutum PMID:9536073 AgBase
E6
protein E6
protein from Gossypium hirsutum PMID:1631059 AgBase
EF1A1
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A2
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A4
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A5
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A9
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EL737995
EST00002 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B3
protein from Gossypium hirsutum PMID:18043952 AgBase
EL737996
EST00003 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B4
protein from Gossypium hirsutum PMID:18043952 AgBase
EL737997
EST00004 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B5
protein from Gossypium hirsutum PMID:18043952 AgBase
EL737998
EST00005 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B7
protein from Gossypium hirsutum PMID:18043952 AgBase
EL737999
EST00006 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B8
protein from Gossypium hirsutum PMID:18043952 AgBase
EL738000
EST00007 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B9
protein from Gossypium hirsutum PMID:18043952 AgBase
EL738002
EST00009 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B12
protein from Gossypium hirsutum PMID:18043952 AgBase
EL738003
EST000010 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B13
protein from Gossypium hirsutum PMID:18043952 AgBase
EL738010
EST000017 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B24
protein from Gossypium hirsutum PMID:18043952 AgBase
EL738016
EST000023 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B31
protein from Gossypium hirsutum PMID:18043952 AgBase
EL738017
EST000024 Gossypium hirsutum Fiber SSH cDNA Library Gossypium hirsutum cDNA clone CS-B33
protein from Gossypium hirsutum PMID:18043952 AgBase
Exp1
Alpha-expansin
protein from Gossypium hirsutum PMID:12242493 AgBase
FSltp1
Non-specific lipid-transfer protein
protein from Gossypium hirsutum PMID:10634943 AgBase
FSltp2
Non-specific lipid-transfer protein
protein from Gossypium hirsutum PMID:10634943 AgBase
FSltp3
Non-specific lipid-transfer protein
protein from Gossypium hirsutum PMID:10634943 AgBase
GhGlu1
"Endo-1,3-beta-glucanase"
protein from Gossypium hirsutum PMID:15557097 AgBase
GhKCBP
Kinesin-like calmodulin binding protein
protein from Gossypium hirsutum PMID:12746521 AgBase
GhPFN1
Six-day Cotton fiber Gossypium hirsutum cDNA 5- similar to (AF092547) profilin [Ricinus communis]
protein from Gossypium hirsutum PMID:16001260 AgBase
GhRac1
RAC-like G-protein Rac 1
protein from Gossypium hirsutum PMID:15358513 AgBase
GhSuSy
Sucrose synthase
protein from Gossypium hirsutum PMID:12671090 AgBase
GhTUB1
Beta tubulin 1
protein from Gossypium hirsutum PMID:17506877 AgBase
GhTUB1
Tubulin beta-1
protein from Gossypium hirsutum PMID:12376634 AgBase
Glp1
Fiber protein GLP2
protein from Gossypium hirsutum PMID:14648117 AgBase
KCH1
Kinesin
protein from Gossypium hirsutum PMID:15557092 AgBase
kch2
Kinesin-related protein
protein from Gossypium hirsutum PMID:19416090 AgBase
MIP
Delta-TIP homolog
protein from Gossypium hirsutum PMID:9536073 AgBase
MYB109
Myb family transcription factor 109
protein from Gossypium hirsutum PMID:17506877 AgBase
MYB2
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:17506877 AgBase
PEPC1
Phosphoenolpyruvate carboxylase 1
protein from Gossypium hirsutum PMID:9536073 AgBase
PEPC2
Phosphoenolpyruvate carboxylase
protein from Gossypium hirsutum PMID:19815688 AgBase
PMA
Plasma membrane H+-ATPase
protein from Gossypium hirsutum PMID:9536073 AgBase
RDL
Dehydration-induced protein RD22-like protein
protein from Gossypium hirsutum PMID:17506877 AgBase
RING1
E3 ubiquitin-protein ligase RING1
protein from Gossypium hirsutum PMID:20376576 AgBase
SCP
Putative serine carboxypeptidase
protein from Gossypium hirsutum PMID:17506877 AgBase
TUBA
Alpha-tubulin
protein from Gossypium hirsutum PMID:9536073 AgBase
UBC1
Ubiquitin-conjugating enzyme E2
protein from Gossypium hirsutum PMID:12591614 AgBase
UBC2
Ubiquitin-conjugating enzyme E2
protein from Gossypium hirsutum PMID:12591614 AgBase
VacInv1
Vacuolar invertase 1
protein from Gossypium hirsutum PMID:20300865 AgBase
vacInv2
Vacuolar invertase 2
protein from Gossypium hirsutum PMID:20300865 AgBase
VPP
H+-pyrophosphatase
protein from Gossypium hirsutum PMID:9536073 AgBase
WBC1
ABC transporter
protein from Gossypium hirsutum PMID:12972649 AgBase

seed trichome initiation stage ; PO:0025370

A seed trichome development stage which occurs during the interval between the onset of seed trichome initiation and the onset of seed trichome elongation.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
A3F7Q2
Benzoquinone reductase
protein from Gossypium hirsutum PMID:18534861 AgBase
A3F7Q3
Benzoquinone reductase
protein from Gossypium hirsutum PMID:18534861 AgBase
A3F7Q4
Phenylcoumaran benzylic ether reductase-like protein
protein from Gossypium hirsutum DOI:10.1007/s10535-008-0147-8 AgBase
ACY
Acyltransferase-like protein
protein from Gossypium hirsutum PMID:17506877 AgBase
BCP1
Copper binding protein 1
protein from Gossypium hirsutum PMID:21029107 AgBase
BCP2
Copper binding protein 2
protein from Gossypium hirsutum PMID:21029107 AgBase
BCP3
Copper binding protein 3
protein from Gossypium hirsutum PMID:21029107 AgBase
BCP4
Copper binding protein 4
protein from Gossypium hirsutum PMID:21029107 AgBase
CVA69.24
V-type proton ATPase catalytic subunit A
protein from Gossypium hirsutum PMID:9536073 AgBase
EF1A1
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A2
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A4
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A5
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
EF1A9
Elongation factor 1-alpha
protein from Gossypium hirsutum PMID:17107762 AgBase
FDH
Fiddlehead-like protein
protein from Gossypium hirsutum PMID:17506877 AgBase
FSltp4
Lipid transfer protein
protein from Gossypium hirsutum PMID:17715150 AgBase
GhSuSy
Sucrose synthase
protein from Gossypium hirsutum PMID:12228669 AgBase
GhTUB1
Beta tubulin 1
protein from Gossypium hirsutum PMID:17506877 AgBase
GhVIN1
Vacuolar invertase
protein from Gossypium hirsutum PMID:20699399 AgBase
myb109
Transcription factor myb109
protein from Gossypium hirsutum PMID:14580676 AgBase
MYB109
Myb family transcription factor 109
protein from Gossypium hirsutum PMID:17506877 AgBase
MYB2
MYB-like DNA-binding domain protein
protein from Gossypium hirsutum PMID:17506877 AgBase
PEPC1
Phosphoenolpyruvate carboxylase 1
protein from Gossypium hirsutum PMID:9536073 AgBase
RDL
Dehydration-induced protein RD22-like protein
protein from Gossypium hirsutum PMID:17506877 AgBase
SCP
Putative serine carboxypeptidase
protein from Gossypium hirsutum PMID:17506877 AgBase
VPP
H+-pyrophosphatase
protein from Gossypium hirsutum PMID:9536073 AgBase

seed trichome secondary wall biosynthesis stage ; PO:0025372

A seed trichome development stage which occurs during the interval between the onset of seed trichome secondary wall biosynthesis and the onset of seed trichome maturation.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
A3F7Q2
Benzoquinone reductase
protein from Gossypium hirsutum PMID:18534861 AgBase
A3F7Q3
Benzoquinone reductase
protein from Gossypium hirsutum PMID:18534861 AgBase
ATub2
Alpha-tubulin 2
protein from Gossypium hirsutum PMID:20148073 AgBase
CitSUSA
Sucrose synthase
protein from Gossypium hirsutum PMID:20148073 AgBase
CSD3
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CSD3s
Superoxide dismutase [Cu-Zn]
protein from Gossypium hirsutum PMID:18425534 AgBase
CTL1
Chitinase-like protein
protein from Gossypium hirsutum PMID:15284492 AgBase
CTL2
Chitinase-like protein
protein from Gossypium hirsutum PMID:15284492 AgBase
G1JRK6
Sucrose synthase isoform C
protein from Gossypium hirsutum PMID:21757635 AgBase
GhEX1
Expansin
protein from Gossypium hirsutum PMID:20148073 AgBase
ghmyb36
GHMYB36
protein from Gossypium hirsutum PMID:20148073 AgBase
ghmyb9
GHMYB9
protein from Gossypium hirsutum PMID:20148073 AgBase
GhTub
Beta-tubulin 2
protein from Gossypium hirsutum PMID:20148073 AgBase
Q39777
Putative uncharacterized protein
protein from Gossypium hirsutum PMID:7770543 AgBase
RAC13
Rac-like GTP-binding protein RAC13
protein from Gossypium hirsutum PMID:15358513 AgBase
RAC9
Rac-like GTP-binding protein RAC9
protein from Gossypium hirsutum PMID:15358513 AgBase

seed micropyle ; PO:0006334

A plant anatomical space that is enclosed by and forms an opening in a seed coat at the apex of a seed and is the remnant of a micropyle.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
PHE1
AT1G65330
protein from Arabidopsis thaliana PMID:15619622 TAIR GO

testa ; PO:0020057

That part of the seed coat that develops from the outer integument, or from the single integument when there is only one.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ARA12
AT5G67360
protein from Arabidopsis thaliana PMID:18266922 TAIR GO
N4646
M18 Lutrantest
germplasm from Arabidopsis thaliana NASC:N4646 NASC
NCED9
AT1G78390
protein from Arabidopsis thaliana PMID:22171989 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:16243908 TAIR GO
TTG1
AT5G24520
protein from Arabidopsis thaliana PMID:14675433 TAIR GO

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