plant ovule

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Annotations to plant ovule ; PO:0020003 and its children

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seed funicle ; PO:0006332

A cardinal part of multi-tissue plant structure (PO:0025498) that is attached to a seed (PO:0009010) and is the remnants of a funicle (PO:0020006).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
SIAR1
AT1G44800
protein from Arabidopsis thaliana PMID:22312005 TAIR GO

integument ; PO:0020021

A portion of plant tissue (PO:0009007) that usually covers a plant ovule (PO:0020003), enveloping a nucellus (PO:0020020) and forming a micropyle (PO:0020025) at the apex.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ACR4
At3g59420
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
ATS
AT5G42630
protein from Arabidopsis thaliana PMID:16623911 TAIR GO
PMID:19291320
BEL1
At5g41410
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DA1
AT1G19270
protein from Arabidopsis thaliana PMID:18483219 TAIR GO
ENP
AT4G31820
protein from Arabidopsis thaliana PMID:17913786 TAIR GO
FLC
AT5G10140
protein from Arabidopsis thaliana PMID:18250331 TAIR GO
HD3A
HEADING DATE 3A
gene from Oryza sativa PMID:7896104 Gramene
(via Gramene Genes)
HLL
At1g17560
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
INO
At1g23420
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
MIOX4
AT4G26260
protein from Arabidopsis thaliana PMID:15660207 TAIR GO
MYB5
AT3G13540
protein from Arabidopsis thaliana PMID:19136646 TAIR GO
P103-B2
small interfering RNA P103-B2
gene from Oryza sativa PMID:11978873 Gramene
(via Gramene Genes)
P107-E1
small interfering RNA P107-E1
gene from Oryza sativa PMID:10528264 Gramene
(via Gramene Genes)
SEU
At1g43850
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SIN2
At2g41670
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
STV1
At3g53020
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SUS1
At1g01040
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TSO1
At3g22780
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
VDD
AT5G18000
protein from Arabidopsis thaliana PMID:20581305 TAIR GO

inner integument ; PO:0020022

The innermost of the two layers of tissue that usually cover the ovule, contiguous to the nucellus and usually contributing to the formation of the micropyle at the apex.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ATHB-15
AT1G52150
protein from Arabidopsis thaliana PMID:19054366 TAIR GO
DELTA-VPE
AT3G20210
protein from Arabidopsis thaliana PMID:15705955 TAIR GO
MAPKKK7
AT3G13530
protein from Arabidopsis thaliana PMID:19123141 TAIR GO
PDIL1-1
AT1G21750
protein from Arabidopsis thaliana PMID:18676877 TAIR GO
PHB
AT2G34710
protein from Arabidopsis thaliana PMID:19054366 TAIR GO
PHV
AT1G30490
protein from Arabidopsis thaliana PMID:19054366 TAIR GO
RBE
AT5G06070
protein from Arabidopsis thaliana PMID:16412084 TAIR GO
TRANS11
AT4G18270
protein from Arabidopsis thaliana TAIR:Publication:501709563 TAIR GO

endothelium ; PO:0020024

A portion of plant tissue composed of cells of the inner epidermis of the inner (or only) integument of the ovule that are radially elongated and metabolically very active.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
BAN
AT1G61720
protein from Arabidopsis thaliana PMID:16167896 TAIR GO
STK
AT4G09960
protein from Arabidopsis thaliana PMID:22176531 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:16243908 TAIR GO
TT12
AT3G59030
protein from Arabidopsis thaliana PMID:11283341 TAIR GO
PMID:16169962
TT16
AT5G23260
protein from Arabidopsis thaliana PMID:22176531 TAIR GO

integument epidermis ; PO:0006043

A portion epidermis that is part of an integument.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CR4
AT3G59420
protein from Arabidopsis thaliana PMID:15772284 TAIR GO
P4-D6
small interfering RNA P4-D6
gene from Oryza sativa PMID:10528264 Gramene
(via Gramene Genes)

micropyle ; PO:0020025

A plant anatomical space that is enclosed by and forms an opening in an integument at the apex of an ovule.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
LRR XI-23
AT1G09970
protein from Arabidopsis thaliana PMID:20811905 TAIR GO

seed micropyle ; PO:0006334

A plant anatomical space that is enclosed by and forms an opening in a seed coat at the apex of a seed and is the remnant of a micropyle.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
PHE1
AT1G65330
protein from Arabidopsis thaliana PMID:15619622 TAIR GO

outer integument ; PO:0020023

One of the two layers of tissue that usually cover the ovule, contiguous to the inner integument and usually involved in forming the micropyle at the apex.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AHL15
AT3G55560
protein from Arabidopsis thaliana PMID:19291320 TAIR GO
AMY1
AT4G25000
protein from Arabidopsis thaliana PMID:15927942 TAIR GO
ERF38
AT2G35700
protein from Arabidopsis thaliana PMID:18723362 TAIR GO
GA20OX2
AT5G51810
protein from Arabidopsis thaliana PMID:15927942 TAIR GO
GA20OX3
AT5G07200
protein from Arabidopsis thaliana PMID:15927942 TAIR GO
GA3OX4
AT1G80330
protein from Arabidopsis thaliana PMID:15927942 TAIR GO
GL2
AT1G79840
protein from Arabidopsis thaliana PMID:16169962 TAIR GO
MAPKKK7
AT3G13530
protein from Arabidopsis thaliana PMID:19123141 TAIR GO
PER36
AT3G50990
protein from Arabidopsis thaliana PMID:23572548 TAIR
RBE
AT5G06070
protein from Arabidopsis thaliana PMID:16412084 TAIR GO
SUC2
AT1G22710
protein from Arabidopsis thaliana PMID:16169962 TAIR GO
WIH2
AT2G41420
protein from Arabidopsis thaliana PMID:21658947 TAIR GO

nucellus ; PO:0020020

A megasporangium (PO:0025201) in a seed plant, composed of fleshy subepidermal tissue that is part of a plant ovule (PO:0020003) and surrounds a megasporocyte (PO:0000431).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CIN1
SUPERNUMERARY BRACT
gene from Oryza sativa GR ref:10120 Gramene
(via Gramene Genes)
PMID:7896104
ENP
AT4G31820
protein from Arabidopsis thaliana PMID:17913786 TAIR GO

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