vascular system

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Annotations to vascular system ; PO:0000034 and its children

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phloem ; PO:0005417

A portion of vascular tissue (PO:0009015) that has as parts sieve elements (PO:0025406).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT2G28810.1
AT2G28810
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
FTIP1
AT5G06850
protein from Arabidopsis thaliana PMID:22529749 TAIR GO
NRT1.12
AT3G16180
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NTHK1
ethylene receptor homolog
gene from Nicotiana PMID:12154144 SGN
(via SGN Genes)
OBP2
AT1G07640
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
OPT3
AT4G16370
protein from Arabidopsis thaliana PMID:24867923 TAIR GO
PGR5
AT2G05620
protein from Arabidopsis thaliana PMID:18663471 TAIR GO
PN
PURPLE NODE
gene from Oryza sativa PMID:16263903 Gramene
(via Gramene Genes)
PP2-A1
AT4G19840
protein from Arabidopsis thaliana PMID:12529520 TAIR GO
PMID:20442276
PP2-A2
AT4G19850
protein from Arabidopsis thaliana PMID:12529520 TAIR GO
PMID:20442276
PROT1
AT2G39890
protein from Arabidopsis thaliana PMID:15618414 TAIR GO
QUA1
AT3G25140
protein from Arabidopsis thaliana PMID:16059719 TAIR GO
ROC3
AT2G16600
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
SAHH2
AT3G23810
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
sks5
AT1G76160
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
SKS6
AT1G41830
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
SUC2
AT1G22710
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
PMID:7647685
SUT4
AT1G09960
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
SWEET11
AT3G48740
protein from Arabidopsis thaliana PMID:22157085 TAIR GO
SWEET12
AT5G23660
protein from Arabidopsis thaliana PMID:22157085 TAIR GO
TGG1
AT5G26000
protein from Arabidopsis thaliana PMID:16640593 TAIR GO
TGG2
AT5G25980
protein from Arabidopsis thaliana PMID:16640593 TAIR GO
TMO6
AT5G60200
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
TPX1
AT1G65980
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
TSF
AT4G20370
protein from Arabidopsis thaliana PMID:15951566 TAIR GO
UBC30
AT5G56150
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
UGP1
AT3G03250
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
UGP2
AT5G17310
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
VOZ1
AT1G28520
protein from Arabidopsis thaliana PMID:15295067 TAIR GO
WNK8
AT5G41990
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
WRKY18
AT4G31800
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO

companion cell ; PO:0000071

A parenchyma cell (PO:0000074) that is adjacent to a sieve tube element (PO:0000289) and arises from the same phloem mother cell (PO:0000400) as the sieve tube element.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ADG1
AT5G48300
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL1
AT5G19220
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL2
AT1G27680
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL3
AT4G39210
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APS2
AT1G05610
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
AT2G28810.1
AT2G28810
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
FT
AT1G65480
protein from Arabidopsis thaliana PMID:17540570 TAIR GO
FTIP1
AT5G06850
protein from Arabidopsis thaliana PMID:22529749 TAIR GO
GDH1
AT5G18170
protein from Arabidopsis thaliana PMID:16418233 TAIR GO
GDH2
AT5G07440
protein from Arabidopsis thaliana PMID:16418233 TAIR GO
HA3
AT5G57350
protein from Arabidopsis thaliana PMID:8718619 TAIR GO
MADS22 gene from Oryza sativa PMID:16926158 Gramene
(via Gramene Genes)
NAKR1
AT5G02600
protein from Arabidopsis thaliana PMID:21193571 TAIR GO
NPF2.9
AT1G18880
protein from Arabidopsis thaliana PMID:21571952 TAIR GO
ORC2
Origin recognition complex subunit 2
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
PNH1
PINHEAD 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
RCN1
Putative phosphatidylethanolamine-binding protein
gene from Oryza sativa PMID:15255870 Gramene
(via Gramene Genes)
RCN2
Putative phosphatidylethanolamine-binding protein
gene from Oryza sativa PMID:18034312 Gramene
(via Gramene Genes)

protophloem ; PO:0006077

A portion of primary phloem (PO:0006075) tissue has as parts the first-formed sieve elements (PO:0025406) at a particular location and does not have companion cells (PO:0000071, in angiosperms) or albuminous cells (PO:0025412, in gymnosperms) associated with the sieve elements.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
APL
AT1G79430
protein from Arabidopsis thaliana PMID:14614507 TAIR GO
AUX1
AT2G38120
protein from Arabidopsis thaliana PMID:11641271 TAIR GO
PMID:16690816

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