vascular system

Filter annotations displayed help!
Filter annotations
View annotations

Annotations to vascular system ; PO:0000034 and its children

Get this data as RDF-XML.

vascular system ; PO:0000034

A maximal portion of vascular tissue (PO:0009015) in a whole plant (PO:0000003), collective plant structure (PO:0025497), multi-tissue plant structure (PO:0025496), or cardinal part of multi-tissue plant structure (PO:0025498).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ACI1
AT5G01370
protein from Arabidopsis thaliana PMID:18713402 TAIR GO
ARABIDILLO-1
AT2G44900
protein from Arabidopsis thaliana PMID:16434475 TAIR GO
ARR9
AT3G57040
protein from Arabidopsis thaliana PMID:14973166 TAIR GO
AT1G77200.1
AT1G77200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G56350.1
AT3G56350
protein from Arabidopsis thaliana PMID:22992509 TAIR GO
AVP1
At1g15690
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
CASPL2A2
AT3G14380
protein from Arabidopsis thaliana PMID:22992509 TAIR GO
CAX2
AT3G13320
protein from Arabidopsis thaliana PMID:15821993 TAIR GO
CLE13
AT1G73965
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE41
AT3G24770
protein from Arabidopsis thaliana PMID:21693505 TAIR GO
CLE44
AT4G13195
protein from Arabidopsis thaliana PMID:21693505 TAIR GO
CUL4
At5g46210
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
CYCA2;1
AT5G25380
protein from Arabidopsis thaliana PMID:21772250 TAIR GO
CYCH;1
AT5G27620
protein from Arabidopsis thaliana PMID:23656895 TAIR GO
CYP711A1
AT2G26170
protein from Arabidopsis thaliana PMID:15737939 TAIR GO
DAG2
AT2G46590
protein from Arabidopsis thaliana PMID:12084825 TAIR GO
DCP1
AT1G08370
protein from Arabidopsis thaliana PMID:17158604 TAIR GO
DCP2
AT5G13570
protein from Arabidopsis thaliana PMID:17158604 TAIR GO
DCP2
At5g13570
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DOT1
At2g36120
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
eEF-1Bb1
AT1G30230
protein from Arabidopsis thaliana PMID:22272350 TAIR GO
EMB2597
At4g13750
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
GAMMA-TIP
AT2G36830
protein from Arabidopsis thaliana PMID:19229639 TAIR GO
HCC1
AT3G08950
protein from Arabidopsis thaliana PMID:21041373 TAIR GO
HEC3
AT5G09750
protein from Arabidopsis thaliana PMID:17855426 TAIR GO
HO3
AT1G69720
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HO4
AT1G58300
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HSD1
AT5G50600
protein from Arabidopsis thaliana PMID:17616511 TAIR GO
IBR5
At2g04550
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
INT2
AT1G30220
protein from Arabidopsis thaliana PMID:20230529 TAIR GO
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNB
large vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBLFARRO
large vascular bundle number to leaf area ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBSPKNBRO
large vascular bundle number to spikelet number ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBSPKNBRO
large vascular bundle number to spikelet number ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBSPKNBRO
large vascular bundle number to spikelet number ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBSPKNBRO
large vascular bundle number to spikelet number ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
LVBNBSPKNBRO
large vascular bundle number to spikelet number ratio
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
MDO1
AT1G56260
protein from Arabidopsis thaliana PMID:21781195 TAIR GO
MIR824A
AT4G24415
miRNA from Arabidopsis thaliana PMID:24876250 TAIR
MYBR1
AT5G67300
protein from Arabidopsis thaliana PMID:18162593 TAIR GO
MYC4
AT4G17880
protein from Arabidopsis thaliana PMID:21335373 TAIR GO
NHX8
AT1G14660
protein from Arabidopsis thaliana PMID:17270011 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
PHO1;H3
AT1G14040
protein from Arabidopsis thaliana PMID:24420568 TAIR GO
PRMT4A
AT5G49020
protein from Arabidopsis thaliana PMID:18660432 TAIR GO
PRMT4B
AT3G06930
protein from Arabidopsis thaliana PMID:18660432 TAIR GO
RHA2B
AT2G01150
protein from Arabidopsis thaliana PMID:12062802 TAIR GO
RR3
AT2G41310
protein from Arabidopsis thaliana PMID:14973166 TAIR GO
SAM1
AT1G02500
protein from Arabidopsis thaliana PMID:2535470 TAIR GO
SFC
At5g13300
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SHR
AT4G37650
protein from Arabidopsis thaliana PMID:24517883 TAIR GO
SNX2a
AT5G58440
protein from Arabidopsis thaliana PMID:21156856 TAIR GO
SNX2b
AT5G07120
protein from Arabidopsis thaliana PMID:21156856 TAIR GO
SPL14
AT1G20980
protein from Arabidopsis thaliana PMID:15703061 TAIR GO
STZ
AT1G27730
protein from Arabidopsis thaliana PMID:18156220 TAIR GO
SUC2
AT1G22710
protein from Arabidopsis thaliana PMID:12954621 TAIR GO
SULTR2;1
AT5G10180
protein from Arabidopsis thaliana PMID:9380766 TAIR GO
SUT4
AT1G09960
protein from Arabidopsis thaliana PMID:10948254 TAIR GO
SVBNB
small vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
SVBNB
small vascular bundle number
QTL from Oryza sativa GR ref:11453 Gramene
(via Gramene QTL)
TGH
At5g23080
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TPST
At1g08030
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
TTL3
At2g42580
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
VIK
At1g14000
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
VIT1
AT2G01770
protein from Arabidopsis thaliana PMID:17082420 TAIR GO
VUP1
AT3G21710
protein from Arabidopsis thaliana PMID:24567189 TAIR GO
WOL
AT2G01830
protein from Arabidopsis thaliana PMID:15155880 TAIR GO
XTH24
AT4G30270
protein from Arabidopsis thaliana PMID:16830179 TAIR GO

anther vascular system ; PO:0008013

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a anther.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO

cotyledon vascular system ; PO:0000035

A vascular system that is part of a cotyledon.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ARGAH1
AT4G08900
protein from Arabidopsis thaliana PMID:18425591 TAIR GO
ARGAH2
AT4G08870
protein from Arabidopsis thaliana PMID:18425591 TAIR GO
ARR6
AT5G62920
protein from Arabidopsis thaliana PMID:14973166 TAIR GO
ASA1
AT5G05730
protein from Arabidopsis thaliana PMID:18435826 TAIR GO
ASB1
AT1G25220
protein from Arabidopsis thaliana PMID:18435826 TAIR GO
AT1G22270.1
AT1G22270
protein from Arabidopsis thaliana PMID:19929876 TAIR GO
AT2G47050.1
AT2G47050
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G46960.1
AT3G46960
protein from Arabidopsis thaliana PMID:21535471 TAIR GO
AT4G29650.1
AT4G29650
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
At5PT13
At1g05630
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
ATH1
AT4G32980
protein from Arabidopsis thaliana PMID:17908157 TAIR GO
AtIPS1
At4g39800
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
BIN4
AT5G24630
protein from Arabidopsis thaliana PMID:18055605 TAIR GO
CDC48
AT3G09840
protein from Arabidopsis thaliana PMID:8521820 TAIR GO
CKX6
AT3G63440
protein from Arabidopsis thaliana PMID:14555694 TAIR GO
CVP2
At1g05470
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DAZ2
AT4G35280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
DCP5
At1g26110
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
E2F1
AT5G22220
protein from Arabidopsis thaliana PMID:16514015 TAIR GO
FKD1
At3g63300
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
FRA8
AT2G28110
protein from Arabidopsis thaliana PMID:16272433 TAIR GO
INT4
AT4G16480
protein from Arabidopsis thaliana PMID:16603666 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
KNAT3
AT5G25220
protein from Arabidopsis thaliana PMID:9161040 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC11
AT5G03260
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LFR
At3g22990
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
LP1
AT2G38540
protein from Arabidopsis thaliana PMID:20667964 TAIR GO
LTP
AT2G15050
protein from Arabidopsis thaliana PMID:20667964 TAIR GO
LTP5
AT3G51600
protein from Arabidopsis thaliana PMID:20667964 TAIR GO
LTP6
AT3G08770
protein from Arabidopsis thaliana PMID:20667964 TAIR GO
LTPG3
AT1G18280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MLO1
AT4G02600
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO12
AT2G39200
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO13
AT4G24250
protein from Arabidopsis thaliana PMID:16525893 TAIR
MLO2
AT1G11310
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO3
AT3G45290
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO4
AT1G11000
protein from Arabidopsis thaliana PMID:16525893 TAIR
MLO5
AT2G33670
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO6
AT1G61560
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MPB2C
AT5G08120
protein from Arabidopsis thaliana PMID:17965274 TAIR GO
NAC015
AT1G33280
protein from Arabidopsis thaliana PMID:20197506 TAIR GO
NAC070
AT4G10350
protein from Arabidopsis thaliana PMID:20197506 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
NUC-L1
AT1G48920
protein from Arabidopsis thaliana PMID:17369435 TAIR GO
OCT1
AT1G73220
protein from Arabidopsis thaliana PMID:17521409 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
P5CS2
AT3G55610
protein from Arabidopsis thaliana PMID:17971042 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PHT4;5
AT5G20380
protein from Arabidopsis thaliana PMID:19513231 TAIR GO
PLDDELTA
AT4G35790
protein from Arabidopsis thaliana PMID:11489173 TAIR GO
PLP3a
AT3G50960
protein from Arabidopsis thaliana PMID:18390592 TAIR GO
PRHA
AT4G29940
protein from Arabidopsis thaliana PMID:9351248 TAIR GO
PRR3
AT5G60100
protein from Arabidopsis thaliana PMID:18055606 TAIR GO
PSK2
AT2G22860
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK3
AT3G44735
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK4
AT3G49780
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK5
AT5G65870
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PUB22
AT3G52450
protein from Arabidopsis thaliana PMID:18771922 TAIR GO
PUB23
AT2G35930
protein from Arabidopsis thaliana PMID:18771922 TAIR GO
PUB24
AT3G11840
protein from Arabidopsis thaliana PMID:18771922 TAIR GO
RAB1A
AT5G47200
protein from Arabidopsis thaliana PMID:21269510 TAIR GO
RALF1
AT1G02900
protein from Arabidopsis thaliana PMID:18494498 TAIR GO
RPS5A
AT3G11940
protein from Arabidopsis thaliana PMID:11684664 TAIR GO
RXF12
AT1G58370
protein from Arabidopsis thaliana PMID:12154138 TAIR GO
S1P
AT5G19660
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
SERAT1;1
AT5G56760
protein from Arabidopsis thaliana PMID:15579666 TAIR GO
SERAT2;2
AT3G13110
protein from Arabidopsis thaliana PMID:15579666 TAIR GO
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SMT2
At1g20330
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SP1L3
AT3G02180
protein from Arabidopsis thaliana PMID:16478750 TAIR GO
SQS2
AT4G34650
protein from Arabidopsis thaliana PMID:18236008 TAIR GO
STV1
At3g53020
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SUS1
AT5G20830
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS3
AT4G02280
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
TGH
AT5G23080
protein from Arabidopsis thaliana PMID:16024589 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO

embryo vascular system ; PO:0008011

Vascular system of embryo.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
BHLH32
AT3G25710
protein from Arabidopsis thaliana PMID:20220754 TAIR GO
CVP2
AT1G05470
protein from Arabidopsis thaliana PMID:15100402 TAIR GO
CYP707A1
AT4G19230
protein from Arabidopsis thaliana PMID:16543410 TAIR GO
CYP707A2
AT2G29090
protein from Arabidopsis thaliana PMID:16543410 TAIR GO
NPY3
AT5G67440
protein from Arabidopsis thaliana PMID:19075219 TAIR GO
NPY4
AT2G23050
protein from Arabidopsis thaliana PMID:19075219 TAIR GO
NPY5
AT4G37590
protein from Arabidopsis thaliana PMID:19075219 TAIR GO
PID2
AT2G26700
protein from Arabidopsis thaliana PMID:19075219 TAIR GO
TAA1
AT1G70560
protein from Arabidopsis thaliana PMID:18394996 TAIR GO
TMO6
AT5G60200
protein from Arabidopsis thaliana PMID:20220754 TAIR GO

hypocotyl vascular system ; PO:0008015

Vascular system of the hypocotyl.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT2G44300.1
AT2G44300
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
AT3G46960.1
AT3G46960
protein from Arabidopsis thaliana PMID:21535471 TAIR GO
AT4G29650.1
AT4G29650
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
FKD1
AT3G63300
protein from Arabidopsis thaliana PMID:20626652 TAIR GO
IRX3
AT5G17420
protein from Arabidopsis thaliana PMID:17041031 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
P5CS2
AT3G55610
protein from Arabidopsis thaliana PMID:17971042 TAIR GO
PRHA
AT4G29940
protein from Arabidopsis thaliana PMID:9351248 TAIR GO
TAA1
AT1G70560
protein from Arabidopsis thaliana PMID:18394997 TAIR GO
THIC
AT2G29630
protein from Arabidopsis thaliana PMID:18332905 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

filament vascular system ; PO:0008014

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a filament.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO

fruit vascular system ; PO:0008003

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a fruit.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
NPF2.12
AT1G27080
protein from Arabidopsis thaliana PMID:19050168 TAIR GO
SOFL1
AT1G26210
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SOFL2
AT1G68870
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SUS1
AT5G20830
protein from Arabidopsis thaliana PMID:17257168 TAIR GO

leaf lamina vascular system ; PO:0000048

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf lamina.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO

leaf lamina vein ; PO:0020138

A phyllome lamina vein (PO:0025348) that is part of a leaf lamina vascular system (PO:0000048).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ACS4
AT2G22810
protein from Arabidopsis thaliana PMID:15699063 TAIR GO
AKN2
AT4G39940
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
APK
AT2G14750
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
APK3
AT3G03900
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
APK4
AT5G67520
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
AT3G15356.1
AT3G15356
protein from Arabidopsis thaliana PMID:19214436 TAIR GO
  • na
bm1
GRMZM5G844562
gene from Zea mays PMID:21423772 POC:Ethan Johnson
(via MaizeGDB)
  • na
bm3
AC196475.3_FG004
gene from Zea mays PMID:21423772 POC:Ethan Johnson
(via MaizeGDB)
chln
Solyc01g100490
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
CPR1
AT4G12560
protein from Arabidopsis thaliana PMID:19682297 TAIR GO
CUL1
AT4G02570
protein from Arabidopsis thaliana PMID:23319550 TAIR GO
GLU1
AT5G04140
protein from Arabidopsis thaliana PMID:16407450 TAIR GO
KCO1
AT5G55630
protein from Arabidopsis thaliana PMID:12148538 TAIR GO
N129
Reticulata: Glabra
germplasm from Arabidopsis thaliana NASC:N129 NASC
N3308 germplasm from Arabidopsis thaliana NASC:N3308 NASC
N349
rosfolmut (F71)
germplasm from Arabidopsis thaliana NASC:N349 NASC
N546
flacovcost (V76)
germplasm from Arabidopsis thaliana NASC:N546 NASC
N606
grivicht (V156)
germplasm from Arabidopsis thaliana NASC:N606 NASC
N692
varmargch (V276)
germplasm from Arabidopsis thaliana NASC:N692 NASC
NRP1
AT2G03440
protein from Arabidopsis thaliana PMID:20016941 TAIR GO
NTHK1
ethylene receptor homolog
gene from Nicotiana PMID:12154144 SGN
(via SGN Genes)
PHT4;5
AT5G20380
protein from Arabidopsis thaliana PMID:19513231 TAIR GO
PTB1
AT3G01150
protein from Arabidopsis thaliana PMID:19122186 TAIR GO
PTB2
AT5G53180
protein from Arabidopsis thaliana PMID:19122186 TAIR GO
RSH1
AT4G02260
protein from Arabidopsis thaliana PMID:18535838 TAIR GO
RSH3
AT1G54130
protein from Arabidopsis thaliana PMID:18535838 TAIR GO
SOFL1
AT1G26210
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SOFL2
AT1G68870
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SPX1
AT5G20150
protein from Arabidopsis thaliana PMID:18315545 TAIR GO
SPX3
AT2G45130
protein from Arabidopsis thaliana PMID:18315545 TAIR GO
SUS1
AT5G20830
protein from Arabidopsis thaliana PMID:8220487 TAIR GO
sut4
sucrose transporter 4
gene from Solanum lycopersicum PMID:10948254 SGN
(via SGN Genes)
GO
TRN1
AT5G55540
protein from Arabidopsis thaliana PMID:16531491 TAIR GO
TRN2
AT5G46700
protein from Arabidopsis thaliana PMID:16531491 TAIR GO
YSL1
AT4G24120
protein from Arabidopsis thaliana PMID:16297069 TAIR GO

primary leaf vein ; PO:0025413

A leaf lamina vein (PO:0020138) that connects directly to a petiole vascular system (PO:0000052) or a shoot axis vascular system (PO:0000039).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
NPF1.2
AT1G52190
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NRT1.12
AT3G16180
protein from Arabidopsis thaliana PMID:24006285 TAIR GO

leaf midvein ; PO:0020139

A primary leaf vein (PO:0025413) that is the central vein of a vascular leaf (PO:0009025).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
117B
117B bm2 gt1 ^Hi27
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
119F
119F bm2
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
201A
201A mrl1-IHO
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
209C
209C bm6-86-87-8875-6
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
415E
415E bm3-2001PR-1
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
419E
419E gl7 v17 bm3
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
4305E
4305E Pm*-N2443
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
504I
504I bm5-PI251930
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
504J
504J bm5-PI262480
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
511J
511J bm1-PI251009
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
511K
511K bm1-N2331B
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
5803C
5803C bm*-PI228174
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
5803E
5803E bm*-PI251893
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
5803I
5803I bm7-PI267186
stock from Zea mays MaizeGDB:892690 MGCSC
(via MaizeGDB stock)
AT1G11370.1
AT1G11370
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G77655.1
AT1G77655
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G03130.1
AT2G03130
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G17940.1
AT2G17940
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G11080.2
AT5G11080
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
bf1
blue fluorescent1
gene from Zea mays
  • IMP
    • With from MaizeGDB:def(Bf1..bm4)044-4
MaizeGDB:13541 MaizeGDB
bl
Solyc11g069030
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
  • na
bm1
GRMZM5G844562
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm1-N2331B
MaizeGDB:59052 POC:Ethan Johnson
(via MaizeGDB)
  • IMP
    • With from MaizeGDB:bm1
MaizeGDB:59052
  • IMP
    • With from MaizeGDB:bm1-mu1972
MaizeGDB:59052
  • IMP
    • With from MaizeGDB:bm1-PI251009
MaizeGDB:59052
  • IMP
    • With from MaizeGDB:bm1-mu1971
MaizeGDB:59052
PMID:21423772
bm2
brown midrib2
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm2
MaizeGDB:13196 MaizeGDB
  • na
bm3
AC196475.3_FG004
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm3-Burnham
MaizeGDB:13341 POC:Ethan Johnson
(via MaizeGDB)
  • IMP
    • With from MaizeGDB:bm3-1
    • With from MaizeGDB:bm3-2
MaizeGDB:13341
  • IMP
    • With from MaizeGDB:bm3-2001PR-1
MaizeGDB:13341
  • IMP
    • With from MaizeGDB:bm3-91598-3
MaizeGDB:13341
  • IMP
    • With from MaizeGDB:bm3
MaizeGDB:13341
PMID:21423772
bm4
brown midrib4
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm4
MaizeGDB:13193 MaizeGDB
bm5
brown midrib5
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm5-PI251930
MaizeGDB:1187452 MaizeGDB
  • IMP
    • With from MaizeGDB:bm5-PI262480
MaizeGDB:1187452
bm6
brown midrib6
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm6-86-87-8875-6
MaizeGDB:1187452 MaizeGDB
bm7
brown midrib7
gene from Zea mays
  • IMP
    • With from MaizeGDB:bm7-PI267186
MaizeGDB:892690 MaizeGDB
CHAL
AT2G30370
protein from Arabidopsis thaliana PMID:20056678 TAIR GO
DL
DROOPING LEAF
gene from Oryza sativa PMID:14729915 POC:Laurel Cooper
(via Gramene Genes)
e
Solyc04g076850
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
GO
EXPA10
AT1G26770
protein from Arabidopsis thaliana PMID:10931949 TAIR GO
FBD1
AT4G13985
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GA3OX3
AT4G21690
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
Gail's Sweet Plum Tomato germplasm from Solanum lycopersicum SGN ref:861 SGN
(via SGN Germplasm)
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
LeT6
Solyc02g081120
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
lxm1
lax midrib1
gene from Zea mays
  • IMP
    • With from MaizeGDB:Lxm1-N1600
MaizeGDB:13422 MaizeGDB
  • IMP
    • With from MaizeGDB:Lxm1
MaizeGDB:13422
  • IMP
    • With from MaizeGDB:Lxm1-N1600
MaizeGDB:13422
  • IMP
    • With from MaizeGDB:Lxm1
MaizeGDB:13422
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
mrl1
midribless1
gene from Zea mays
  • IMP
    • With from MaizeGDB:mrl1-IHO
MaizeGDB:112748 MaizeGDB
  • IMP
    • With from MaizeGDB:mrl1-1
MaizeGDB:112748
NST1
AT2G46770
protein from Arabidopsis thaliana PMID:16214898 TAIR GO
pm1
pale midrib1
gene from Zea mays
  • IMP
    • With from MaizeGDB:pm1
MaizeGDB:13185 MaizeGDB
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
spc1
speckled1
gene from Zea mays
  • IMP
    • With from MaizeGDB:Spc1-N1376
MaizeGDB:58640 MaizeGDB
SPL11
SPOTTED LEAF 11
gene from Oryza sativa PMID:10939258 POC:Laurel Cooper
(via Gramene Genes)
SPX4
AT5G15330
protein from Arabidopsis thaliana PMID:18315545 TAIR GO
SYP72
AT3G45280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO

lateral leaf vein ; PO:0006011

An unbranched second order leaf vein (PO:0020140) that runs between two adjacent primary leaf veins (PO:0025413).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
LeT6
Solyc02g081120
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)

petiole vascular system ; PO:0000052

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf petiole.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ARF6
AT1G30330
protein from Arabidopsis thaliana PMID:17021043 TAIR GO
ARF8
AT5G37020
protein from Arabidopsis thaliana PMID:17021043 TAIR GO
AT1G17310.1
AT1G17310
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB87
AT4G37780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO

carpel vascular system ; PO:0005019

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a carpel.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
flo4
GRAIN INCOMPLETE FILLING 1
gene from Oryza sativa PMID:18820698 Gramene
(via Gramene Genes)
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO

stigma vascular system ; PO:0008012

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a stigma.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
CIPK7
AT3G23000
protein from Arabidopsis thaliana PMID:15665497 TAIR GO

leaf vascular system ; PO:0000036

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG25
AT1G71960
protein from Arabidopsis thaliana PMID:20133881 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABF2
AT1G45249
protein from Arabidopsis thaliana PMID:16284313 TAIR GO
AGL28
AT1G01530
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AGP40
AT3G20865
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
APUM23
At1g72320
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G73560.1
AT1G73560
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G77200.1
AT1G77200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G80580.1
AT1G80580
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G22760.1
AT2G22760
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G33260.1
AT2G33260
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G44300.1
AT2G44300
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
AT2G47050.1
AT2G47050
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G14880.1
AT3G14880
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G46960.1
AT3G46960
protein from Arabidopsis thaliana PMID:21535471 TAIR GO
AT4G29650.1
AT4G29650
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G39590.1
AT4G39590
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G14980.1
AT5G14980
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G17080.1
AT5G17080
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G58680.1
AT5G58680
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ATH1
AT4G32980
protein from Arabidopsis thaliana PMID:17908157 TAIR GO
ATSBT5.2
AT1G20160
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
ATSTE14B
AT5G08335
protein from Arabidopsis thaliana PMID:12472689 TAIR GO
BLOS1
AT2G30330
protein from Arabidopsis thaliana PMID:20971704 TAIR GO
BZIP17
AT2G40950
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
CAND1
AT2G02560
protein from Arabidopsis thaliana PMID:16943276 TAIR GO
CIPK7
AT3G23000
protein from Arabidopsis thaliana PMID:15665497 TAIR GO
CLE12
AT1G68795
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE18
AT1G66145
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CUL4
AT5G46210
protein from Arabidopsis thaliana PMID:16792691 TAIR GO
CVP2
AT1G05470
protein from Arabidopsis thaliana PMID:15100402 TAIR GO
CYP710A2
AT2G34490
protein from Arabidopsis thaliana PMID:16531502 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO
DAZ2
AT4G35280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
DMAS1
Zinc-regulated transporter 1
gene from Oryza sativa PMID:16263903 Gramene
(via Gramene Genes)
DOT3
At5g10250
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DOT5
At1g13290
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
DSO4
At1g17840
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
E13L3
AT5G08000
protein from Arabidopsis thaliana PMID:19223515 TAIR GO
FKD1
AT3G63300
protein from Arabidopsis thaliana PMID:20626652 TAIR GO
FRA8
AT2G28110
protein from Arabidopsis thaliana PMID:16272433 TAIR GO
FRY1
At5g63980
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17237350 TAIR GO
GHR1
AT4G20940
protein from Arabidopsis thaliana PMID:22730405 TAIR
GORK
AT5G37500
protein from Arabidopsis thaliana PMID:14596925 TAIR GO
GRV2
AT2G26890
protein from Arabidopsis thaliana PMID:15466218 TAIR GO
HB-8
AT4G32880
protein from Arabidopsis thaliana PMID:12447534 TAIR GO
HB20
AT3G01220
protein from Arabidopsis thaliana PMID:12644682 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
HKT1
AT4G10310
protein from Arabidopsis thaliana PMID:12417304 TAIR GO
HMA4
AT2G19110
protein from Arabidopsis thaliana PMID:15670847 TAIR GO
HO3
AT1G69720
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HO4
AT1G58300
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
INT4
AT4G16480
protein from Arabidopsis thaliana PMID:16603666 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
IRX3
AT5G17420
protein from Arabidopsis thaliana PMID:17041031 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC11
AT5G03260
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC12
AT5G05390
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC5
AT2G40370
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAP2
AT4G30920
protein from Arabidopsis thaliana PMID:21569035 TAIR GO
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MLO2
AT1G11310
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO4
AT1G11000
protein from Arabidopsis thaliana PMID:16525893 TAIR
MLO6
AT1G61560
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MSL10
AT5G12080
protein from Arabidopsis thaliana PMID:18485707 TAIR GO
MYB116
AT1G25340
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB87
AT4G37780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB99
AT5G62320
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
NAS1
GOLD HULL AND INTERNODE 2
gene from Oryza sativa GR ref:5652 Gramene
(via Gramene Genes)
NAS3
PINHEAD1
gene from Oryza sativa PMID:12000455 Gramene
(via Gramene Genes)
NF-YA5
AT1G54160
protein from Arabidopsis thaliana PMID:18682547 TAIR GO
NKS1
AT4G30996
protein from Arabidopsis thaliana PMID:21227472 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
NRAMP3
AT2G23150
protein from Arabidopsis thaliana PMID:12787249 TAIR GO
NUC-L1
AT1G48920
protein from Arabidopsis thaliana PMID:17369435 TAIR GO
NUDT11
AT5G45940
protein from Arabidopsis thaliana PMID:19340986 TAIR GO
OCT1
AT1G73220
protein from Arabidopsis thaliana PMID:17521409 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
OZS1
AT1G12480
protein from Arabidopsis thaliana PMID:18305484 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PCAP1
AT4G20260
protein from Arabidopsis thaliana PMID:17264065 TAIR GO
PCR2
AT1G14870
protein from Arabidopsis thaliana PMID:20647347 TAIR GO
PDCB1
AT5G61130
protein from Arabidopsis thaliana PMID:19223515 TAIR GO
PDCB3
AT1G18650
protein from Arabidopsis thaliana PMID:19223515 TAIR GO
PDX1.2
AT3G16050
protein from Arabidopsis thaliana PMID:16766694 TAIR GO
PERK7
AT1G49270
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
PLDDELTA
AT4G35790
protein from Arabidopsis thaliana PMID:11489173 TAIR GO
PLS
AT4G39403
protein from Arabidopsis thaliana PMID:12172017 TAIR GO
PMT5
AT3G18830
protein from Arabidopsis thaliana PMID:15525644 TAIR GO
PRR3
AT5G60100
protein from Arabidopsis thaliana PMID:18055606 TAIR GO
PSK2
AT2G22860
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK3
AT3G44735
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK4
AT3G49780
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
PSK5
AT5G65870
protein from Arabidopsis thaliana PMID:16829587 TAIR GO
RAB1A
AT5G47200
protein from Arabidopsis thaliana PMID:21269510 TAIR GO
RGLG1
AT3G01650
protein from Arabidopsis thaliana PMID:17586653 TAIR GO
RGLG2
AT5G14420
protein from Arabidopsis thaliana PMID:17586653 TAIR GO
RKL1
AT1G48480
protein from Arabidopsis thaliana PMID:21532992 TAIR GO
RLK902
AT3G18740
protein from Arabidopsis thaliana PMID:21532992 TAIR GO
RR1
AT3G16857
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR10
AT4G31920
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR12
AT2G25180
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR13
AT2G27070
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR2
AT4G16110
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RR20
AT3G62670
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
S1P
AT5G19660
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
SBT1.3
AT5G51750
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SBT3.12
AT4G21326
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SBT3.3
AT1G32960
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SE
At2g27100
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SIP4
AT2G30360
protein from Arabidopsis thaliana PMID:17483306 TAIR GO
SK6
AT3G53060
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SOX
AT3G01910
protein from Arabidopsis thaliana PMID:17425719 TAIR GO
SQS2
AT4G34650
protein from Arabidopsis thaliana PMID:18236008 TAIR GO
STV1
AT3G53020
protein from Arabidopsis thaliana PMID:16227452 TAIR GO
SUS1
AT5G20830
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SYP125
AT1G11250
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
TAA1
AT1G70560
protein from Arabidopsis thaliana PMID:18394996 TAIR GO
TGH
AT5G23080
protein from Arabidopsis thaliana PMID:16024589 TAIR GO
TRN2
AT5G46700
protein from Arabidopsis thaliana PMID:17351828 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO
UGT84A2
AT3G21560
protein from Arabidopsis thaliana PMID:17217457 TAIR GO
UPS5
AT1G26440
protein from Arabidopsis thaliana PMID:16738859 TAIR GO
UVI4
AT2G42260
protein from Arabidopsis thaliana PMID:16623893 TAIR GO
VEP1
AT4G24220
protein from Arabidopsis thaliana PMID:11917087 TAIR GO
WDR5a
AT3G49660
protein from Arabidopsis thaliana PMID:19567704 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO
XTH18
AT4G30280
protein from Arabidopsis thaliana PMID:16830179 TAIR GO
XYP2
AT2G13820
protein from Arabidopsis thaliana PMID:21558309 TAIR GO

petal vascular system ; PO:0000054

A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a petal (PO:0025218).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G39590.1
AT4G39590
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AtVEX1
AT5G62850
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CLE16
AT2G01505
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CYP704B1
AT1G69500
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GA3OX3
AT4G21690
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ht2
hexose transporter 2
gene from Solanum lycopersicum PMID:11198428 SGN
(via SGN Genes)
GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC1
AT1G18140
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC5
AT2G40370
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MLO6
AT1G61560
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MSS1
AT5G26340
protein from Arabidopsis thaliana PMID:16616142 TAIR GO
NDT2
AT1G25380
protein from Arabidopsis thaliana PMID:19745225 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PRS
AT2G28610
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
RSW10
AT1G71100
protein from Arabidopsis thaliana PMID:17059404 TAIR GO
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SIN2
At2g41670
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

sepal vascular system ; PO:0004723

A phyllome vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a sepal.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
ARGAH2
AT4G08870
protein from Arabidopsis thaliana PMID:18425591 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G01050.1
AT5G01050
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CLE16
AT2G01505
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE18
AT1G66145
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CYP704B1
AT1G69500
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO
GA3OX1
AT1G15550
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
GA3OX2
AT1G80340
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC1
AT1G18140
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC10
AT5G01190
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC14
AT5G09360
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC17
AT5G60020
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC2
AT2G29130
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
LAC5
AT2G40370
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
MIPS3
AT5G10170
protein from Arabidopsis thaliana PMID:20215587 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
PARL1
At1g48920
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
PUM9
AT1G35730
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
RR13
AT2G27070
protein from Arabidopsis thaliana PMID:15173562 TAIR GO
RSW10
AT1G71100
protein from Arabidopsis thaliana PMID:17059404 TAIR GO
TT10
AT5G48100
protein from Arabidopsis thaliana PMID:21063888 TAIR GO
UBP19
AT2G24640
protein from Arabidopsis thaliana PMID:18485060 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

portion of vascular tissue ; PO:0009015

A portion of plant tissue (PO:0009007) that has as part one or more tracheary elements (PO:0000290) or sieve elements (PO:0025406).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ACT12
AT3G46520
protein from Arabidopsis thaliana PMID:8771777 TAIR GO
AGB1
AT4G34460
protein from Arabidopsis thaliana PMID:18441222 TAIR GO
AGO10
AT5G43810
protein from Arabidopsis thaliana PMID:14564520 TAIR GO
PMID:18653559
AGO6
AT2G32940
protein from Arabidopsis thaliana PMID:20173091 TAIR GO
AGP31
AT1G28290
protein from Arabidopsis thaliana PMID:17885091 TAIR GO
AHP4
AT3G16360
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
ARAD1
AT2G35100
protein from Arabidopsis thaliana PMID:16377743 TAIR GO
ARF19
AT1G19220
protein from Arabidopsis thaliana PMID:15659631 TAIR GO
ARF2
AT5G62000
protein from Arabidopsis thaliana PMID:15960614 TAIR GO
ARK3
AT1G12430
protein from Arabidopsis thaliana PMID:17971038 TAIR GO
AT1G27030.1
AT1G27030
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT1G52000.1
AT1G52000
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT1G57590.1
AT1G57590
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT1G65690.1
AT1G65690
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT1G80130.1
AT1G80130
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT2G33260.1
AT2G33260
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G37870.1
AT2G37870
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT3G02480.1
AT3G02480
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT3G25290.1
AT3G25290
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT3G53980.1
AT3G53980
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT4G00670.1
AT4G00670
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT4G14090.1
AT4G14090
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT4G14270.1
AT4G14270
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
AT5G11080.2
AT5G11080
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G37970.1
AT5G37970
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
ATCAD4
AT3G19450
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
ATHB-15
AT1G52150
protein from Arabidopsis thaliana PMID:15705957 TAIR GO
BAM4
AT5G55700
protein from Arabidopsis thaliana PMID:20153546 TAIR GO
BC1
BRITTLE CULM 1
gene from Oryza sativa PMID:12000455 Gramene
(via Gramene Genes)
BCAT-2
AT1G10070
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
BETA-VPE
AT1G62710
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
BGL2
AT3G57260
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
bHLH39
AT3G56980
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
BPS1
At1g01550
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
CAD1
AT1G72680
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
CAD5
AT4G34230
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
CAD6
AT4G37970
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
CAD9
AT4G39330
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
CALS5
AT2G13680
protein from Arabidopsis thaliana PMID:15842618 TAIR GO
CAX1
AT2G38170
protein from Arabidopsis thaliana PMID:16055687 TAIR GO
CBL1
AT4G17615
protein from Arabidopsis thaliana PMID:17092313 TAIR GO
CDC48
AT3G09840
protein from Arabidopsis thaliana PMID:8521820 TAIR GO
CDF1
AT5G62430
protein from Arabidopsis thaliana PMID:16002617 TAIR GO
CEG
AT3G22650
protein from Arabidopsis thaliana PMID:16525894 TAIR GO
CHI
AT2G43570
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
CIPK1
AT3G17510
protein from Arabidopsis thaliana PMID:17092313 TAIR GO
COR15A
AT2G42540
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
CRN
AT5G13290
protein from Arabidopsis thaliana PMID:18381924 TAIR GO
CT-BMY
AT4G17090
protein from Arabidopsis thaliana PMID:20153546 TAIR GO
CYCA2;3
AT1G15570
protein from Arabidopsis thaliana PMID:16415207 TAIR GO
CYL1
AT5G13690
protein from Arabidopsis thaliana PMID:18782908 TAIR GO
CYTC-2
AT4G10040
protein from Arabidopsis thaliana PMID:16113211 TAIR GO
DAZ2
AT4G35280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
DCAF1
AT4G31160
protein from Arabidopsis thaliana PMID:18552200 TAIR GO
DEL1
AT3G48160
protein from Arabidopsis thaliana PMID:15649366 TAIR GO
DSH1
Dihydrosphingosine C4 hydroxylase
gene from Oryza sativa GR ref:5654 Gramene
(via Gramene Genes)
ECA3
AT1G10130
protein from Arabidopsis thaliana PMID:18024560 TAIR GO
PMID:18567829
ELI3-1
AT4G37980
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
ELI3-2
AT4G37990
protein from Arabidopsis thaliana PMID:17467016 TAIR GO
ERD14
AT1G76180
protein from Arabidopsis thaliana PMID:11292073 TAIR GO
ERF1-1
AT5G47880
protein from Arabidopsis thaliana PMID:16113224 TAIR GO
EXLB1
AT4G17030
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
FBP7
AT1G21760
protein from Arabidopsis thaliana PMID:17240087 TAIR GO
FES1
AT2G33835
protein from Arabidopsis thaliana PMID:16291783 TAIR GO
FKD1
AT3G63300
protein from Arabidopsis thaliana PMID:20626652 TAIR GO
GG1
AT3G63420
protein from Arabidopsis thaliana PMID:18441222 TAIR GO
GGT1
AT4G39640
protein from Arabidopsis thaliana PMID:17316175 TAIR GO
GPT2
AT1G61800
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
GSTF12
AT5G17220
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
HAI2
AT1G07430
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
HB-7
AT2G46680
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
HB-8
AT4G32880
protein from Arabidopsis thaliana PMID:8575317 TAIR GO
HB21
AT2G02540
protein from Arabidopsis thaliana PMID:16244158 TAIR GO
HIS1-3
AT2G18050
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
HVT1
AT2G30800
protein from Arabidopsis thaliana PMID:9225469 TAIR GO
IDL2
AT5G64667
protein from Arabidopsis thaliana PMID:18660431 TAIR GO
IDL3
AT5G09805
protein from Arabidopsis thaliana PMID:18660431 TAIR GO
IDL4
AT3G18715
protein from Arabidopsis thaliana PMID:18660431 TAIR GO
IDL5
AT1G76952
protein from Arabidopsis thaliana PMID:18660431 TAIR GO
IQD1
AT3G09710
protein from Arabidopsis thaliana PMID:15960618 TAIR GO
ITN1
AT3G12360
protein from Arabidopsis thaliana PMID:18643991 TAIR GO
JAL23
AT2G39330
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
KCO1
AT5G55630
protein from Arabidopsis thaliana PMID:16984403 TAIR GO
KCO3
AT5G46360
protein from Arabidopsis thaliana PMID:16984403 TAIR GO
KCO5
AT4G01840
protein from Arabidopsis thaliana PMID:16984403 TAIR GO
LTI30
AT3G50970
protein from Arabidopsis thaliana PMID:11292073 TAIR GO
LTP3
AT5G59320
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
LTP4
AT5G59310
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
MAX2
AT2G42620
protein from Arabidopsis thaliana PMID:17951458 TAIR GO
MBP1
AT1G52040
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
MCA1
AT4G35920
protein from Arabidopsis thaliana PMID:20097794 TAIR GO
MCA2
AT2G17780
protein from Arabidopsis thaliana PMID:20097794 TAIR GO
MIR160A
AT2G39175
miRNA from Arabidopsis thaliana PMID:20136729 TAIR GO
MKK3
AT5G40440
protein from Arabidopsis thaliana PMID:17933903 TAIR GO
MTPA2
AT3G58810
protein from Arabidopsis thaliana PMID:16709200 TAIR GO
MYB51
AT1G18570
protein from Arabidopsis thaliana PMID:17461791 TAIR GO
MYB87
AT4G37780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
N116
auxin overproducing
germplasm from Arabidopsis thaliana NASC:N116 NASC
NATA1
AT2G39030
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
NF-YA10
AT5G06510
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
NPH4
AT5G20730
protein from Arabidopsis thaliana PMID:15659631 TAIR GO
NSI
AT1G32070
protein from Arabidopsis thaliana PMID:16461385 TAIR GO
NST1
AT2G46770
protein from Arabidopsis thaliana PMID:16214898 TAIR GO
NTL8
AT2G27300
protein from Arabidopsis thaliana PMID:17410378 TAIR GO
NUDT24
AT5G19470
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
OASA1
AT4G14880
protein from Arabidopsis thaliana PMID:11121418 TAIR GO
PAP17
AT3G17790
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
PER64
AT5G42180
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
PHB
AT2G34710
protein from Arabidopsis thaliana PMID:15598805 TAIR GO
PHO2
AT2G33770
protein from Arabidopsis thaliana PMID:18390805 TAIR GO
PHV
AT1G30490
protein from Arabidopsis thaliana PMID:14561401 TAIR GO
PID
AT2G34650
protein from Arabidopsis thaliana PMID:11641228 TAIR GO
PLA2-BETA
AT2G19690
protein from Arabidopsis thaliana PMID:18725378 TAIR GO
PLDP2
AT3G05630
protein from Arabidopsis thaliana PMID:16617110 TAIR GO
PMT5
AT3G18830
protein from Arabidopsis thaliana PMID:15598803 TAIR GO
PNH1
PINHEAD 1
gene from Oryza sativa PMID:16808934 Gramene
(via Gramene Genes)
PNP-A
AT2G18660
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
PYD4
AT3G08860
protein from Arabidopsis thaliana PMID:18296723 TAIR GO
QQT1
AT5G22370
protein from Arabidopsis thaliana PMID:17419841 TAIR GO
RBK1
AT5G10520
protein from Arabidopsis thaliana PMID:18088316 TAIR GO
RBL
AT3G21060
protein from Arabidopsis thaliana PMID:21423667 TAIR GO
REV
AT5G60690
protein from Arabidopsis thaliana PMID:15598805 TAIR GO
ROXY1
AT3G02000
protein from Arabidopsis thaliana PMID:15728668 TAIR GO
RTE1
AT2G26070
protein from Arabidopsis thaliana PMID:17999643 TAIR GO
SAC1
AT1G22620
protein from Arabidopsis thaliana PMID:15805481 TAIR GO
SCP2
AT5G42890
protein from Arabidopsis thaliana PMID:18687588 TAIR GO
SIM
AT5G04470
protein from Arabidopsis thaliana PMID:17098811 TAIR GO
SIP1;2
AT5G18290
protein from Arabidopsis thaliana PMID:16223486 TAIR GO
SIP1A
AT3G04090
protein from Arabidopsis thaliana PMID:16223486 TAIR GO
SIP2;1
AT3G56950
protein from Arabidopsis thaliana PMID:16223486 TAIR GO
sks16
AT2G23630
protein from Arabidopsis thaliana PMID:22992509 TAIR GO
SPL9
AT2G42200
protein from Arabidopsis thaliana PMID:18492871 TAIR GO
SVL1
AT5G55480
protein from Arabidopsis thaliana PMID:18718934 TAIR GO
TCH2
AT5G37770
protein from Arabidopsis thaliana PMID:16113225 TAIR GO
TCP14
AT3G47620
protein from Arabidopsis thaliana PMID:17953649 TAIR GO
TMAC2
AT3G02140
protein from Arabidopsis thaliana PMID:18484180 TAIR GO
TPST
AT1G08030
protein from Arabidopsis thaliana PMID:19666544 TAIR GO
TRO
AT1G51450
protein from Arabidopsis thaliana PMID:21423667 TAIR GO
TSD2
AT1G78240
protein from Arabidopsis thaliana PMID:17461780 TAIR GO
TUB8
AT5G23860
protein from Arabidopsis thaliana PMID:9678573 TAIR GO
UBC4
AT5G41340
protein from Arabidopsis thaliana PMID:8790283 TAIR GO
VLN1
AT2G29890
protein from Arabidopsis thaliana PMID:10631247 TAIR GO
YUC4
AT5G11320
protein from Arabidopsis thaliana PMID:16818609 TAIR GO
ZEU1
AT5G59440
protein from Arabidopsis thaliana PMID:18036198 TAIR GO
ZIP4
AT1G10970
protein from Arabidopsis thaliana PMID:18296723 TAIR GO

phloem ; PO:0005417

A portion of vascular tissue (PO:0009015) that has as parts sieve elements (PO:0025406).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCB11
AT1G02520
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCB15
AT3G28345
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ALDH11A3
AT2G24270
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
ALS3
AT2G37330
protein from Arabidopsis thaliana PMID:15659095 TAIR GO
PMID:18485061
AT1G03220.1
AT1G03220
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT1G33600.1
AT1G33600
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT1G33610.1
AT1G33610
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT1G78850.1
AT1G78850
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
AT2G03500.1
AT2G03500
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
AT2G28810.1
AT2G28810
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
AT3G43430.1
AT3G43430
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
BZIP9
AT5G24800
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
C
CHROMOGEN FOR ANTHOCYANIN
gene from Oryza sativa PMID:15255870 Gramene
(via Gramene Genes)
CalS7
AT1G06490
protein from Arabidopsis thaliana PMID:21175885 TAIR GO
CAT3
AT1G20620
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
CCH
AT3G56240
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
CLV1
AT1G75820
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
CPC
AT2G46410
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
DAG1
AT3G61850
protein from Arabidopsis thaliana PMID:11842145 TAIR GO
DAR2
AT2G39830
protein from Arabidopsis thaliana PMID:21749503 TAIR GO
DELTA-TIP
AT3G16240
protein from Arabidopsis thaliana PMID:8624437 TAIR GO
DHAR1
AT1G19570
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
FTIP1
AT5G06850
protein from Arabidopsis thaliana PMID:22529749 TAIR GO
GATL10
AT3G28340
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL3
AT1G13250
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL6
AT4G02130
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL7
AT3G62660
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GER3
AT5G20630
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GGT1
AT4G39640
protein from Arabidopsis thaliana PMID:17316175 TAIR GO
GSTF10
AT2G30870
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GSTF2
AT4G02520
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GSTF3
AT2G02930
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GSTF9
AT2G30860
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
PMID:20442276
GSTU19
AT1G78380
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
GUT1
AT5G61840
protein from Arabidopsis thaliana PMID:18980662 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
HKT1
AT4G10310
protein from Arabidopsis thaliana PMID:12727868 TAIR GO
HOG1
AT4G13940
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
INT4
AT4G16480
protein from Arabidopsis thaliana PMID:16603666 TAIR GO
IPL3
INHIBITOR FOR PURPLE LEAF 3
gene from Oryza sativa PMID:16926158 Gramene
(via Gramene Genes)
ISI1
AT4G27750
protein from Arabidopsis thaliana TAIR:Publication:501713883 TAIR GO
PMID:16805736
KAN
AT5G16560
protein from Arabidopsis thaliana PMID:14561401 TAIR GO
KNAT4
AT5G11060
protein from Arabidopsis thaliana PMID:19704797 TAIR GO
KT2/3
AT4G22200
protein from Arabidopsis thaliana PMID:10377458 TAIR GO
PMID:18485061
LGT9
AT1G24170
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
LOS2
AT2G36530
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
mtLPD1
AT1G48030
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
mtLPD2
AT3G17240
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
MYR1
AT5G18240
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
MYR2
AT3G04030
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC082
AT5G09330
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
NIP6;1
AT1G80760
protein from Arabidopsis thaliana PMID:18952773 TAIR GO
NPF1.2
AT1G52190
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NPF2.13
AT1G69870
protein from Arabidopsis thaliana PMID:19734434 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
NRT1.12
AT3G16180
protein from Arabidopsis thaliana PMID:24006285 TAIR GO
NTHK1
ethylene receptor homolog
gene from Nicotiana PMID:12154144 SGN
(via SGN Genes)
OBP2
AT1G07640
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
OPT3
AT4G16370
protein from Arabidopsis thaliana PMID:24867923 TAIR GO
PGR5
AT2G05620
protein from Arabidopsis thaliana PMID:18663471 TAIR GO
PN
PURPLE NODE
gene from Oryza sativa PMID:16263903 Gramene
(via Gramene Genes)
PP2-A1
AT4G19840
protein from Arabidopsis thaliana PMID:12529520 TAIR GO
PMID:20442276
PP2-A2
AT4G19850
protein from Arabidopsis thaliana PMID:12529520 TAIR GO
PMID:20442276
PROT1
AT2G39890
protein from Arabidopsis thaliana PMID:15618414 TAIR GO
QUA1
AT3G25140
protein from Arabidopsis thaliana PMID:16059719 TAIR GO
ROC3
AT2G16600
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
SAHH2
AT3G23810
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
sks5
AT1G76160
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
SKS6
AT1G41830
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
SUC2
AT1G22710
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
PMID:7647685
SUT4
AT1G09960
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
SWEET11
AT3G48740
protein from Arabidopsis thaliana PMID:22157085 TAIR GO
SWEET12
AT5G23660
protein from Arabidopsis thaliana PMID:22157085 TAIR GO
TGG1
AT5G26000
protein from Arabidopsis thaliana PMID:16640593 TAIR GO
TGG2
AT5G25980
protein from Arabidopsis thaliana PMID:16640593 TAIR GO
TMO6
AT5G60200
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
TPX1
AT1G65980
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
TSF
AT4G20370
protein from Arabidopsis thaliana PMID:15951566 TAIR GO
UBC30
AT5G56150
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
UGP1
AT3G03250
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
UGP2
AT5G17310
protein from Arabidopsis thaliana PMID:20442276 TAIR GO
VOZ1
AT1G28520
protein from Arabidopsis thaliana PMID:15295067 TAIR GO
WNK8
AT5G41990
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
WRKY18
AT4G31800
protein from Arabidopsis thaliana PMID:18485061 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO

companion cell ; PO:0000071

A parenchyma cell (PO:0000074) that is adjacent to a sieve tube element (PO:0000289) and arises from the same phloem mother cell (PO:0000400) as the sieve tube element.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ADG1
AT5G48300
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL1
AT5G19220
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL2
AT1G27680
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APL3
AT4G39210
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
APS2
AT1G05610
protein from Arabidopsis thaliana PMID:15598655 TAIR GO
AT2G28810.1
AT2G28810
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
FT
AT1G65480
protein from Arabidopsis thaliana PMID:17540570 TAIR GO
FTIP1
AT5G06850
protein from Arabidopsis thaliana PMID:22529749 TAIR GO
GDH1
AT5G18170
protein from Arabidopsis thaliana PMID:16418233 TAIR GO
GDH2
AT5G07440
protein from Arabidopsis thaliana PMID:16418233 TAIR GO
HA3
AT5G57350
protein from Arabidopsis thaliana PMID:8718619 TAIR GO
MADS22 gene from Oryza sativa PMID:16926158 Gramene
(via Gramene Genes)
NAKR1
AT5G02600
protein from Arabidopsis thaliana PMID:21193571 TAIR GO
NPF2.9
AT1G18880
protein from Arabidopsis thaliana PMID:21571952 TAIR GO
ORC2
Origin recognition complex subunit 2
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
PNH1
PINHEAD 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
RCN1
Putative phosphatidylethanolamine-binding protein
gene from Oryza sativa PMID:15255870 Gramene
(via Gramene Genes)
RCN2
Putative phosphatidylethanolamine-binding protein
gene from Oryza sativa PMID:18034312 Gramene
(via Gramene Genes)

protophloem ; PO:0006077

A portion of primary phloem (PO:0006075) tissue has as parts the first-formed sieve elements (PO:0025406) at a particular location and does not have companion cells (PO:0000071, in angiosperms) or albuminous cells (PO:0025412, in gymnosperms) associated with the sieve elements.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
APL
AT1G79430
protein from Arabidopsis thaliana PMID:14614507 TAIR GO
AUX1
AT2G38120
protein from Arabidopsis thaliana PMID:11641271 TAIR GO
PMID:16690816
GATA20
AT2G18380
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAC083
AT5G13180
protein from Arabidopsis thaliana PMID:20388856 TAIR GO

phloem mother cell ; PO:0000400

A cambial initial cell (PO:0000295) which is destined to differentiate into secondary phloem.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
DOF2.4
AT2G37590
protein from Arabidopsis thaliana PMID:16581911 TAIR GO

sieve tube element ; PO:0000289

A sieve element (PO:0025406) that is part of a sieve tube (PO:0025416) and has as parts sieve areas aggregated into sieve plates (GO:0097218).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
RTM1
AT1G05760
protein from Arabidopsis thaliana PMID:11743111 TAIR GO
RTM2
AT5G04890
protein from Arabidopsis thaliana PMID:11743111 TAIR GO
SEOa
AT3G01670
protein from Arabidopsis thaliana PMID:20932300 TAIR GO
SEOR1
AT3G01680
protein from Arabidopsis thaliana PMID:20932300 TAIR GO
SUT2
AT2G02860
protein from Arabidopsis thaliana PMID:14739351 TAIR GO
sut4
sucrose transporter 4
gene from Solanum lycopersicum PMID:10948254 SGN
(via SGN Genes)
GO

secondary xylem ; PO:0005848

A portion of xylem (PO:0005352) tissue that develops from a vascular cambium (PO:0005598).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
GATL10
AT3G28340
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL2
AT3G50760
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL5
AT1G02720
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL6
AT4G02130
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
IRX9
AT2G37090
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
LGT9
AT1G24170
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MYB52
AT1G17950
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB54
AT1G73410
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB69
AT4G33450
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:17237351 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NST1
AT2G46770
protein from Arabidopsis thaliana PMID:17237351 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
PMID:21300919
PgMYB2
R2R3-MYB transcription factor MYB2
gene from Picea glauca PMID:17397551 POC:Ramona Walls
(via NCBI gi)

cell differentiation stage of secondary xylem ; PO:0025469

A secondary xylem development stage (PO:0025427) that occurs during the interval between the end of a cell division stage of secondary xylem (PO:0025463) and the death of the last living cell in the secondary xylem.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
PgMYB2
R2R3-MYB transcription factor MYB2
gene from Picea glauca PMID:17397551 POC:Ramona Walls
(via NCBI gi)

vascular bundle ; PO:0005020

A portion of vascular tissue (PO:0009015) that is a unit strand of the vascular system (PO:0000034) and has as part xylem (PO:0005352) or phloem (PO:0005417).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AAC1
AT3G08580
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AAC2
AT5G13490
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
ABCB11
AT1G02520
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCB14
AT1G28010
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCB15
AT3G28345
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ABCG33
AT2G37280
protein from Arabidopsis thaliana PMID:21239383 TAIR GO
ACBP3
AT4G24230
protein from Arabidopsis thaliana PMID:22345636 TAIR GO
ACT1
AT2G37620
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
ADK1
AT3G09820
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
PMID:17272833
ADK2
AT5G03300
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
AT1G07920.1
AT1G07920
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AT1G33270.1
AT1G33270
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AT1G72730.1
AT1G72730
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AT2G42170.1
AT2G42170
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AT3G04840.1
AT3G04840
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AT4G21650.1
AT4G21650
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
AT5G08670.1
AT5G08670
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
ATCAD4
AT3G19450
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
ATMS1
AT5G17920
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
ATP5
AT5G13450
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
bHLH1
Medtr3g099620
gene from Medicago truncatula PMID:25774204 POC:Ethan Johnson
(via LIS)
BIP1
AT5G28540
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
  • na
bm1
GRMZM5G844562
gene from Zea mays PMID:21423772 POC:Ethan Johnson
(via MaizeGDB)
  • na
bm3
AC196475.3_FG004
gene from Zea mays PMID:21423772 POC:Ethan Johnson
(via MaizeGDB)
BUD2
At5g18930
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
c-NAD-MDH1
AT1G04410
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
CAT3
AT1G20620
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
CIB1
AT4G34530
protein from Arabidopsis thaliana PMID:18988809 TAIR GO
CLO4
AT1G70670
protein from Arabidopsis thaliana PMID:21471120 TAIR GO
CRY2
AT1G04400
protein from Arabidopsis thaliana PMID:17259260 TAIR GO
CSD1
AT1G08830
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
CSD2
AT2G28190
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
CYCA2;4
AT1G80370
protein from Arabidopsis thaliana PMID:21772250 TAIR GO
DMAS1
Zinc-regulated transporter 1
gene from Oryza sativa PMID:15255870 Gramene
(via Gramene Genes)
PMID:14617093
DRT112
AT1G20340
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
EDA9
AT4G34200
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
ER-ANT1
AT5G17400
protein from Arabidopsis thaliana PMID:18296626 TAIR GO
EXO70G2
AT1G51640
protein from Arabidopsis thaliana PMID:20943851 TAIR GO
FBA4
AT5G03690
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
GAD2
AT1G65960
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
GAPC1
AT3G04120
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
GAPC2
AT1G13440
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
GSTF9
AT2G30860
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
HMA2
AT4G30110
protein from Arabidopsis thaliana PMID:15100400 TAIR GO
HMA4
AT2G19110
protein from Arabidopsis thaliana PMID:15100400 TAIR GO
HOG1
AT4G13940
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
IRX12
AT2G38080
protein from Arabidopsis thaliana PMID:21447792 TAIR GO
LOS1
AT1G56070
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
LSI1
Low silicon rice 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
LSI2
Low silicon rice 2
gene from Oryza sativa PMID:16926158 Gramene
(via Gramene Genes)
MLO11
AT5G53760
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
mMDH1
AT1G53240
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
MS2
AT3G03780
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
MUM4
AT1G53500
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
NDT2
AT1G25380
protein from Arabidopsis thaliana PMID:19745225 TAIR GO
NF-YB10
AT3G53340
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
NIP6;1
AT1G80760
protein from Arabidopsis thaliana PMID:18952773 TAIR GO
NOXY2
AT5G11630
protein from Arabidopsis thaliana PMID:23370715 TAIR GO
PCAP1
AT4G20260
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
PGK1
AT3G12780
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
PNH1
PINHEAD 1
gene from Oryza sativa PMID:12000455 POC:Laurel Cooper
(via Gramene Genes)
Prx37
AT4G08770
protein from Arabidopsis thaliana PMID:21044085 TAIR GO
PSBP-1
AT1G06680
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
QQS
AT3G30720
protein from Arabidopsis thaliana PMID:19154206 TAIR GO
RBCS1A
AT1G67090
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
RBCS1B
AT5G38430
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
RBCS3B
AT5G38410
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
SAHH2
AT3G23810
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
PMID:17272833
SAM-2
AT4G01850
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
SAM1
AT1G02500
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
SAMDC
At3g02470
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
SHM4
AT4G13930
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
TCP-1
AT3G20050
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
TGG2
AT5G25980
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
TUA4
AT1G04820
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
TUA5
AT5G19780
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
TUB1
AT1G75780
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
UBQ13
AT1G65350
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
VHA-A
AT1G78900
protein from Arabidopsis thaliana PMID:15971193 TAIR GO
YSL2
yellow stripe 1-like
gene from Oryza sativa PMID:17609219 Gramene
(via Gramene Genes)
ZIP4
NA synthase gene 1
gene from Oryza sativa PMID:16263903 Gramene
(via Gramene Genes)

xylem ; PO:0005352

A portion of vascular tissue (PO:0009015) that has as part one or more tracheary elements (PO:0000290).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AAP6
AT5G49630
protein from Arabidopsis thaliana PMID:12244056 TAIR GO
AT4G27435.1
AT4G27435
protein from Arabidopsis thaliana TAIR:Publication:501729455 TAIR GO
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
ATSBT5.2
AT1G20160
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
CESA4
At5g44030
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
CGT
chlorogenate-dependent caffeoyltransferase
gene from Solanum lycopersicum PMID:20880851 SGN
(via SGN Genes)
CSLA02
AT5G22740
protein from Arabidopsis thaliana TAIR:Publication:501729455 TAIR GO
CTL2
AT3G16920
protein from Arabidopsis thaliana PMID:20056293 TAIR GO
PMID:20056293
DREB19
AT2G38340
protein from Arabidopsis thaliana PMID:21069430 TAIR GO
ELF5A-1
AT1G13950
protein from Arabidopsis thaliana PMID:18304977 TAIR GO
F8H
AT5G22940
protein from Arabidopsis thaliana PMID:19224953 TAIR GO
fer
Solyc06g051550
gene from Solanum lycopersicum PMID:25774204 POC:Ethan Johnson
(via SGN Genes)
FRA8
AT2G28110
protein from Arabidopsis thaliana PMID:16272433 TAIR GO
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20888232 TAIR GO
GLDP1
AT4G33010
protein from Arabidopsis thaliana PMID:17496108 TAIR GO
GLDP2
AT2G26080
protein from Arabidopsis thaliana PMID:17496108 TAIR GO
GUT1
AT5G61840
protein from Arabidopsis thaliana PMID:18980662 TAIR GO
GUT2
AT1G27440
protein from Arabidopsis thaliana TAIR:Publication:501729455 TAIR GO
PMID:18980662
HB-8
AT4G32880
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
HKT1
AT4G10310
protein from Arabidopsis thaliana PMID:16359386 TAIR GO
IRX1
At4g18780
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
IRX10
At1g27440
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
IRX14
At4g36890
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
IRX3
At5g17420
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
IRX4
At1g15950
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
IRX9
At2g37090
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
KNAT7
At1g62990
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
KT2/3
AT4G22200
protein from Arabidopsis thaliana PMID:10929122 TAIR GO
LEW3
At2g40190
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
MHX
AT2G47600
protein from Arabidopsis thaliana PMID:10406802 TAIR GO
MYB20
AT1G66230
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB42
AT4G12350
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB43
AT5G16600
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB52
AT1G17950
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB54
AT1G73410
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB58
AT1G16490
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB61
AT1G09540
protein from Arabidopsis thaliana PMID:22708996 TAIR GO
MYB63
AT1G79180
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB69
AT4G33450
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
N105
gapped xylem (gpx) mutant
germplasm from Arabidopsis thaliana NASC:N105 NASC
N18
IRREGULAR XYLEM1
germplasm from Arabidopsis thaliana NASC:N18 NASC
N19
IRREGULAR XYLEM4
germplasm from Arabidopsis thaliana NASC:N19 NASC
NAC005
AT1G02250
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC076
AT4G36160
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NPF7.2
AT4G21680
protein from Arabidopsis thaliana PMID:20501909 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
PGLP2
AT5G47760
protein from Arabidopsis thaliana PMID:17478634 TAIR GO
PMT1
AT2G16120
protein from Arabidopsis thaliana PMID:19969532 TAIR GO
PMT2
AT2G16130
protein from Arabidopsis thaliana PMID:19969532 TAIR GO
RAC10
AT5G62880
protein from Arabidopsis thaliana PMID:22984069 TAIR GO
ROPGAP3
AT2G46710
protein from Arabidopsis thaliana PMID:22984069 TAIR GO
ROPGEF4
AT2G45890
protein from Arabidopsis thaliana PMID:22984069 TAIR GO
RWA1
AT5G46340
protein from Arabidopsis thaliana PMID:21673009 TAIR GO
RWA2
AT3G06550
protein from Arabidopsis thaliana PMID:21673009 TAIR GO
RWA3
AT2G34410
protein from Arabidopsis thaliana PMID:21673009 TAIR
RWA4
AT1G29890
protein from Arabidopsis thaliana PMID:21673009 TAIR
SWEET17
AT4G15920
protein from Arabidopsis thaliana PMID:23583552 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
WOX4
At1g46480
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
XND1
AT5G64530
protein from Arabidopsis thaliana PMID:15923329 TAIR GO
ZFWD1
AT4G25440
protein from Arabidopsis thaliana PMID:15923329 TAIR GO

primary xylem ; PO:0005849

A portion of xylem (PO:0005352) tissue that develops from the procambium (PO:0025275).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
IRX9
AT2G37090
protein from Arabidopsis thaliana PMID:17322407 TAIR GO
LGT9
AT1G24170
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
NAC007
AT1G12260
protein from Arabidopsis thaliana PMID:16103214 TAIR GO

metaxylem ; PO:0000372

A portion of primary xylem (PO:0005849) tissue that has as part one or more metaxylem tracheary elements (PO:0025576) embedded in parenchyma (PO:0005421) tissue and may contain xylem fiber cells (PO:0000274).

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G28140.1
AT4G28140
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
GATL2
AT3G50760
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
GATL5
AT1G02720
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MYB46
AT5G12870
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
NAC012
AT1G32770
protein from Arabidopsis thaliana PMID:17114348 TAIR GO
NAC101
AT5G62380
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO

protoxylem ; PO:0000272

A portion of primary xylem (PO:0000272) tissue that has as part one or more protoxylem tracheary elements (PO:0025575) embedded in parenchyma (PO:0005421) tissue.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G28140.1
AT4G28140
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
AtMYB103
AT1G63910
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
BHLH32
AT3G25710
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
CLE20
AT1G05065
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
FOR1
floral organ regulator 1
gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
HP6
AT1G80100
protein from Arabidopsis thaliana PMID:16400151 TAIR GO
KNAT7
AT1G62990
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
LGT8
AT1G70090
protein from Arabidopsis thaliana PMID:21300919 TAIR GO
MADS22 gene from Oryza sativa PMID:14617093 Gramene
(via Gramene Genes)
MYB46
AT5G12870
protein from Arabidopsis thaliana PMID:16581911 TAIR GO
MYB52
AT1G17950
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB54
AT1G73410
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB58
AT1G16490
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB63
AT1G79180
protein from Arabidopsis thaliana PMID:19122102 TAIR GO
MYB69
AT4G33450
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
MYB85
AT4G22680
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC010
AT1G28470
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC073
AT4G28500
protein from Arabidopsis thaliana PMID:18952777 TAIR GO
NAC083
AT5G13180
protein from Arabidopsis thaliana PMID:20388856 TAIR GO
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
PMID:20388856
YAB1
YABBY1
gene from Oryza sativa PMID:18034312 Gramene
(via Gramene Genes)

tracheary element ; PO:0000290

A native plant cell (PO:0025606) that has a lignified cell wall with secondary thickening and bordered pits.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ADK1
AT3G09820
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
ADK2
AT5G03300
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
AT5G51890.1
AT5G51890
protein from Arabidopsis thaliana PMID:16446311 TAIR GO
HOG1
AT4G13940
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
JLO
AT4G00220
protein from Arabidopsis thaliana PMID:19088331 TAIR GO
LBD18
AT2G45420
protein from Arabidopsis thaliana PMID:19088331 TAIR GO
SAHH2
AT3G23810
protein from Arabidopsis thaliana PMID:17272833 TAIR GO
XCP1
AT4G35350
protein from Arabidopsis thaliana PMID:11788755 TAIR GO
PMID:11788755
XCP2
AT1G20850
protein from Arabidopsis thaliana PMID:18573193 TAIR GO

tracheid ; PO:0000301

A tracheary element (PO:0000290) that has no perforations in its cell wall.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
px1
class III peroxidase encoding gene 1
gene from Picea abies PMID:16897487 POC:Ramona Walls
(via NCBI gi)

xylem vessel member ; PO:0002003

A tracheary element (PO:0000290) that is part of a xylem vessel (PO:0025417) and has as parts perforation plates.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
TED6
AT1G43790
protein from Arabidopsis thaliana PMID:19383897 TAIR GO
TED7
AT5G48920
protein from Arabidopsis thaliana PMID:19383897 TAIR GO
WAT1
AT1G75500
protein from Arabidopsis thaliana PMID:20497379 TAIR GO

xylem fiber cell ; PO:0000274

A fiber cell (PO:0025407) that is part of a portion of xylem (PO:0005352) tissue.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
PARVUS
AT1G19300
protein from Arabidopsis thaliana PMID:17991630 TAIR GO
WAT1
AT1G75500
protein from Arabidopsis thaliana PMID:20497379 TAIR GO

xylem vessel ; PO:0025417

A portion of xylem (PO:0005352) tissue that has as parts a tube-like series of vessel members (PO:0002003), the common walls of which have perforations.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
REF8
At2g40890
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)

root vascular system ; PO:0003011

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a root.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AAO3
AT2G27150
protein from Arabidopsis thaliana PMID:17010113 TAIR GO
ABA2
AT1G52340
protein from Arabidopsis thaliana PMID:17010113 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
AGL12
AT1G71692
protein from Arabidopsis thaliana PMID:18203871 TAIR GO
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AHL3
AT4G25320
protein from Arabidopsis thaliana PMID:23335615 TAIR GO
AHL4
AT5G51590
protein from Arabidopsis thaliana PMID:23335615 TAIR GO
AlaAT1
AT1G17290
protein from Arabidopsis thaliana PMID:17319845 TAIR GO
ANAC026
AT1G62700
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
APK4
AT5G67520
protein from Arabidopsis thaliana PMID:19304933 TAIR GO
ARGAH1
AT4G08900
protein from Arabidopsis thaliana PMID:18425591 TAIR GO
ARGAH2
AT4G08870
protein from Arabidopsis thaliana PMID:18425591 TAIR GO
ARR3
AT1G59940
protein from Arabidopsis thaliana PMID:14973166 TAIR GO
ARR4
AT1G10470
protein from Arabidopsis thaliana PMID:14973166 TAIR GO
AT1G02710.1
AT1G02710
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G11370.1
AT1G11370
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G24110.1
AT1G24110
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G33930.1
AT1G33930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G48800.1
AT1G48800
protein from Arabidopsis thaliana PMID:20687964 TAIR
AT2G17940.1
AT2G17940
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G24140.1
AT2G24140
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G42480.1
AT2G42480
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G44300.1
AT2G44300
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
AT3G14880.1
AT3G14880
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G24130.1
AT3G24130
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT3G24680.1
AT3G24680
from Arabidopsis thaliana PMID:20687964 TAIR
AT3G46960.1
AT3G46960
protein from Arabidopsis thaliana PMID:21535471 TAIR GO
AT4G29650.1
AT4G29650
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G02640.1
AT5G02640
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G13350.1
AT5G13350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G14980.1
AT5G14980
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G24820.1
AT5G24820
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G58680.1
AT5G58680
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT5G66970.1
AT5G66970
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ATDUF1
AT1G03300
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
ATSBT5.2
AT1G20160
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
ATSERAT3;1
AT2G17640
protein from Arabidopsis thaliana PMID:15579666 TAIR GO
ATSTE14B
AT5G08335
protein from Arabidopsis thaliana PMID:12472689 TAIR GO
ATU2AF35A
AT1G27650
protein from Arabidopsis thaliana PMID:16407443 TAIR GO
BIN2
AT4G18710
protein from Arabidopsis thaliana PMID:17873094 TAIR GO
BZIP17
AT2G40950
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
CAB2
AT1G29920
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
CCC1
AT1G30450
protein from Arabidopsis thaliana PMID:17355435 TAIR GO
CEP3
AT3G48350
protein from Arabidopsis thaliana PMID:21632425 TAIR GO
CIPK7
AT3G23000
protein from Arabidopsis thaliana PMID:15665497 TAIR GO
CKX6
AT3G63440
protein from Arabidopsis thaliana PMID:14555694 TAIR GO
CLE12
AT1G68795
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE25
AT3G28455
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE4
AT2G31081
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CYP710A1
AT2G34500
protein from Arabidopsis thaliana PMID:16531502 TAIR GO
CYP710A2
AT2G34490
protein from Arabidopsis thaliana PMID:16531502 TAIR GO
CYS1
AT5G12140
protein from Arabidopsis thaliana PMID:20526604 TAIR GO
DAZ2
AT4G35280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
DUF 10
AT5G23800
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF2
AT1G11420
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF4
AT2G46840
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF5
AT2G47220
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF6
AT2G47230
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF9
AT5G23780
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
Dwf45
Dwarf-45
gene from Oryza sativa GR ref:5652 Gramene
(via Gramene Genes)
ECIP1
AT4G24800
protein from Arabidopsis thaliana PMID:21631530 TAIR GO
EXGT-A3
AT2G01850
protein from Arabidopsis thaliana PMID:15860011 TAIR GO
EXO70A1
AT5G03540
protein from Arabidopsis thaliana PMID:20943851 TAIR GO
EXO70A2
AT5G52340
protein from Arabidopsis thaliana PMID:20943851 TAIR GO
EXO70G1
AT4G31540
protein from Arabidopsis thaliana PMID:20943851 TAIR GO
EXO70G2
AT1G51640
protein from Arabidopsis thaliana PMID:20943851 TAIR GO
EXO70H7
AT5G59730
protein from Arabidopsis thaliana PMID:20736450 TAIR GO
FBD1
AT4G13985
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
FKD1
AT3G63300
protein from Arabidopsis thaliana PMID:20626652 TAIR GO
GA3OX1
AT1G15550
protein from Arabidopsis thaliana PMID:16460513 TAIR GO
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17237350 TAIR GO
GDU1
AT4G31730
protein from Arabidopsis thaliana PMID:15208395 TAIR GO
GHR1
AT4G20940
protein from Arabidopsis thaliana PMID:22730405 TAIR
GRP2
AT4G38680
protein from Arabidopsis thaliana PMID:17123099 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
HEMD
AT2G26540
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
HMA4
AT2G19110
protein from Arabidopsis thaliana PMID:15670847 TAIR GO
HO3
AT1G69720
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HO4
AT1G58300
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
INT4
AT4G16480
protein from Arabidopsis thaliana PMID:16603666 TAIR GO
KNAT4
AT5G11060
protein from Arabidopsis thaliana PMID:16463096 TAIR GO
LCD1
AT2G37860
protein from Arabidopsis thaliana PMID:23596191 TAIR GO
MLO1
AT4G02600
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO10
AT5G65970
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO11
AT5G53760
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO12
AT2G39200
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO13
AT4G24250
protein from Arabidopsis thaliana PMID:16525893 TAIR
MLO14
AT1G26700
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO2
AT1G11310
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO3
AT3G45290
protein from Arabidopsis thaliana PMID:16525893 TAIR GO
MLO4
AT1G11000
protein from Arabidopsis thaliana PMID:16525893 TAIR
MSL10
AT5G12080
protein from Arabidopsis thaliana PMID:18485707 TAIR GO
MYB116
AT1G25340
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MYB3R-4
AT5G11510
protein from Arabidopsis thaliana PMID:17287251 TAIR GO
MYB77
AT3G50060
protein from Arabidopsis thaliana PMID:17675404 TAIR GO
MYB87
AT4G37780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
NAC007
AT1G12260
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NAC076
AT4G36160
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NAC101
AT5G62380
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NAC105
AT5G66300
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NF-YA5
AT1G54160
protein from Arabidopsis thaliana PMID:18682547 TAIR GO
NF-YC8
AT5G27910
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
nPAP
AT4G32850
protein from Arabidopsis thaliana PMID:19956626 TAIR GO
NPF2.9
AT1G18880
protein from Arabidopsis thaliana PMID:21571952 TAIR GO
NPF8.1
AT3G54140
protein from Arabidopsis thaliana PMID:15500465 TAIR GO
NRAMP4
AT5G67330
protein from Arabidopsis thaliana PMID:16270029 TAIR GO
NUC-L1
AT1G48920
protein from Arabidopsis thaliana PMID:17369435 TAIR GO
NUDT11
AT5G45940
protein from Arabidopsis thaliana PMID:19340986 TAIR GO
OCT1
AT1G73220
protein from Arabidopsis thaliana PMID:17521409 TAIR GO
OFP3
AT5G58360
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
OST1
AT4G33950
protein from Arabidopsis thaliana PMID:12468729 TAIR GO
PAPS1
AT1G17980
protein from Arabidopsis thaliana PMID:19956626 TAIR GO
PC-MYB1
AT4G32730
protein from Arabidopsis thaliana PMID:17287251 TAIR GO
PHO1;H1
AT1G68740
protein from Arabidopsis thaliana PMID:17461783 TAIR GO
POK2
AT3G19050
protein from Arabidopsis thaliana PMID:16682350 TAIR GO
RAD52-1
AT1G71310
protein from Arabidopsis thaliana PMID:22762281 TAIR GO
RBCS1A
AT1G67090
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
REF6
AT3G48430
protein from Arabidopsis thaliana PMID:15377760 TAIR GO
RER1
AT5G22790
protein from Arabidopsis thaliana PMID:23596191 TAIR GO
RER3
AT3G08640
protein from Arabidopsis thaliana PMID:23596191 TAIR GO
RGLG1
AT3G01650
protein from Arabidopsis thaliana PMID:17586653 TAIR GO
RGLG2
AT5G14420
protein from Arabidopsis thaliana PMID:17586653 TAIR GO
RKL1
AT1G48480
protein from Arabidopsis thaliana PMID:21532992 TAIR GO
RLK1
AT5G60900
protein from Arabidopsis thaliana PMID:15388970 TAIR GO
RLK902
AT3G17840
protein from Arabidopsis thaliana PMID:15388970 TAIR GO
RR5
AT3G48100
protein from Arabidopsis thaliana PMID:14973166 TAIR GO
RSW10
AT1G71100
protein from Arabidopsis thaliana PMID:17059404 TAIR GO
RVE1
AT5G17300
protein from Arabidopsis thaliana PMID:19805390 TAIR GO
RXF12
AT1G58370
protein from Arabidopsis thaliana PMID:12154138 TAIR GO
S1P
AT5G19660
protein from Arabidopsis thaliana PMID:17662035 TAIR GO
SAUR68
AT1G29490
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SBT3.3
AT1G32960
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SBT4.12
AT5G59090
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SBT5.4
AT5G59810
protein from Arabidopsis thaliana TAIR:Communication:501721502 TAIR GO
SERAT1;1
AT5G56760
protein from Arabidopsis thaliana PMID:15579666 TAIR GO
SERAT2;1
AT1G55920
protein from Arabidopsis thaliana PMID:15579666 TAIR GO
SERAT3;2
AT4G35640
protein from Arabidopsis thaliana PMID:15579666 TAIR GO
SGP1
AT5G54840
protein from Arabidopsis thaliana PMID:19123141 TAIR GO
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SLAH1
AT1G62280
protein from Arabidopsis thaliana PMID:18305482 TAIR GO
SOX
AT3G01910
protein from Arabidopsis thaliana PMID:17425719 TAIR GO
STV1
AT3G53020
protein from Arabidopsis thaliana PMID:16227452 TAIR GO
SUP
AT3G23130
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SUS5
AT5G37180
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SUS6
AT1G73370
protein from Arabidopsis thaliana PMID:17257168 TAIR GO
SYP72
AT3G45280
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
TAA1
AT1G70560
protein from Arabidopsis thaliana PMID:18394996 TAIR GO
THE1
AT5G54380
protein from Arabidopsis thaliana PMID:17540573 TAIR GO
TLP1
AT4G24180
protein from Arabidopsis thaliana PMID:15988566 TAIR GO
URH1
AT2G36310
protein from Arabidopsis thaliana PMID:19293370 TAIR GO
VAT1
AT5G16290
protein from Arabidopsis thaliana PMID:20497381 TAIR GO
VND1
AT2G18060
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
WOL
AT2G01830
protein from Arabidopsis thaliana PMID:15155880 TAIR GO
WOX13
AT4G35550
protein from Arabidopsis thaliana PMID:18950478 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO
XTH18
AT4G30280
protein from Arabidopsis thaliana PMID:16830179 TAIR GO
XYP2
AT2G13820
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
YUC8
AT4G28720
protein from Arabidopsis thaliana PMID:19805390 TAIR GO

root giant cell ; PO:0005026

Multinucleate cell developed by a series of events involving kayokinesis but not cytokinesis of the initial feeding cell. The events are induced by root knot nematodes (e.g., Meloidogyne sp. ) entering the feeding cells (any cells) of the root vascular system.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
PLE
AT5G51600
protein from Arabidopsis thaliana PMID:18263774 TAIR GO

root syncytium cell ; PO:0005027

Multinucleate cell developed by a series of events involving fusion with the neighboring dividing cells. The events are induced by cyst nematodes (e.g. Heterodera schachtii) entering the feeding cells (any cells) of the root vascular system.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
MIOX1
AT1G14520
protein from Arabidopsis thaliana PMID:19691674 TAIR GO
MIOX2
AT2G19800
protein from Arabidopsis thaliana PMID:19691674 TAIR GO
MIOX4
AT4G26260
protein from Arabidopsis thaliana PMID:19691674 TAIR GO
PMID:19691674
MIOX5
AT5G56640
protein from Arabidopsis thaliana PMID:19691674 TAIR GO
PMID:19691674
STP12
AT4G21480
protein from Arabidopsis thaliana PMID:19487386 TAIR GO

shoot axis vascular system ; PO:0000039

A vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a shoot axis.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
ABCG11
AT1G17840
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG14
AT1G31770
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
ABCG9
AT4G27420
protein from Arabidopsis thaliana PMID:24112720 TAIR GO
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
ANAC026
AT1G62700
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
AT1G48800.1
AT1G48800
protein from Arabidopsis thaliana PMID:20687964 TAIR
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT1G77200.1
AT1G77200
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
AT2G44300.1
AT2G44300
protein from Arabidopsis thaliana PMID:21558309 TAIR GO
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
ATDUF1
AT1G03300
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
CAB2
AT1G29920
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
COV1
At2g20120
gene from Arabidopsis thaliana PMID:25774204 POC:Ethan Johnson
(via TAIR)
CYP710A1
AT2G34500
protein from Arabidopsis thaliana PMID:16531502 TAIR GO
DL
DROOPING LEAF
gene from Oryza sativa GR ref:5652 Gramene
(via Gramene Genes)
DUF5
AT2G47220
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
DUF7
AT3G62300
protein from Arabidopsis thaliana PMID:19795213 TAIR GO
GAUT12
AT5G54690
protein from Arabidopsis thaliana PMID:17237350 TAIR GO
GDU1
AT4G31730
protein from Arabidopsis thaliana PMID:15208395 TAIR GO
HO3
AT1G69720
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
HO4
AT1G58300
protein from Arabidopsis thaliana PMID:16428602 TAIR GO
LHCA1
AT3G54890
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB2.1
AT2G05100
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB2.3
AT3G27690
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB4.2
AT3G08940
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB4.3
AT2G40100
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
LHCB5
AT4G10340
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
MGP
AT1G03840
protein from Arabidopsis thaliana PMID:16640459 TAIR GO
NAC076
AT4G36160
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NAC101
AT5G62380
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
NAC105
AT5G66300
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
NLP7
AT4G24020
protein from Arabidopsis thaliana PMID:18826430 TAIR GO
NRAMP3
AT2G23150
protein from Arabidopsis thaliana PMID:12787249 TAIR GO
NUC
AT5G44160
protein from Arabidopsis thaliana PMID:16640459 TAIR GO
NUDT11
AT5G45940
protein from Arabidopsis thaliana PMID:19340986 TAIR GO
PHO1;H1
AT1G68740
protein from Arabidopsis thaliana PMID:17461783 TAIR GO
RBCS1A
AT1G67090
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
RBCS1B
AT5G38430
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
RBCS3B
AT5G38410
protein from Arabidopsis thaliana PMID:18820083 TAIR GO
RVE1
AT5G17300
protein from Arabidopsis thaliana PMID:19805390 TAIR GO
RXF12
AT1G58370
protein from Arabidopsis thaliana PMID:12154138 TAIR GO
SAUR68
AT1G29490
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SHP1
AT3G58780
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
SIP4
AT2G30360
protein from Arabidopsis thaliana PMID:17483306 TAIR GO
VND7
AT1G71930
protein from Arabidopsis thaliana PMID:16103214 TAIR GO
WOL
AT2G01830
protein from Arabidopsis thaliana PMID:15155880 TAIR GO
WRKY27
AT5G52830
protein from Arabidopsis thaliana PMID:18702671 TAIR GO
XLG1
AT2G23460
protein from Arabidopsis thaliana PMID:17999646 TAIR GO
XLG2
AT4G34390
protein from Arabidopsis thaliana PMID:17999646 TAIR GO
XLG3
AT1G31930
protein from Arabidopsis thaliana PMID:17999646 TAIR GO
YUC8
AT4G28720
protein from Arabidopsis thaliana PMID:19805390 TAIR GO

pedicel vascular system ; PO:0005012

A shoot axis vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a pedicel.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGP19
AT1G68725
protein from Arabidopsis thaliana PMID:17217456 TAIR GO
AT1G58120.1
AT1G58120
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
CLE22
AT5G12235
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
CLE26
AT1G69970
protein from Arabidopsis thaliana PMID:20884811 TAIR GO
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

shoot system vascular system ; PO:0025205

A vascular system that is part of a shoot system.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
XIP1
AT5G49660
protein from Arabidopsis thaliana PMID:21853254 TAIR GO

flower vascular system ; PO:0005017

A shoot system vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in a flower.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AGL12
AT1G71692
protein from Arabidopsis thaliana PMID:18203871 TAIR GO
CVP2
AT1G05470
protein from Arabidopsis thaliana PMID:15100402 TAIR GO
HCA2
AT5G62940
protein from Arabidopsis thaliana PMID:19915089 TAIR GO
NUC-L1
AT1G48920
protein from Arabidopsis thaliana PMID:17369435 TAIR GO
SOFL1
AT1G26210
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
SOFL2
AT1G68870
protein from Arabidopsis thaliana PMID:20011053 TAIR GO
WOX13
AT4G35550
protein from Arabidopsis thaliana PMID:18950478 TAIR GO

inflorescence vascular system ; PO:0005028

A shoot system vascular system that includes the totality of the portions of vascular tissue in their specific arrangement in an inflorescence.

Qualifier Name / Symbol Information Evidence Reference Assigned by Associated to
AT4G30830.1
AT4G30830
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
GATA23
AT5G26930
protein from Arabidopsis thaliana PMID:20687964 TAIR GO
MKK7
AT1G18350
protein from Arabidopsis thaliana PMID:20687964 TAIR GO

Back to top