Plant Ontology Release 1007 (#9) - October 2007

Release Notes Archive

Plant Ontology Release# 1007 October 2007

Plant Ontology Database


Ontology updates

Number of terms:

Total terms 1109
Total children terms in Plant structure 833
New children terms in Plant structure None
Total children terms in Plant growth and development 274
New children terms in Plant growth and development None

Associations / Aannotations

Number of associations/annotations:

Total number of associations 39545
Number of associations NEW 7441
Total number of unique objects (genes & germplasms) 17312
Number of unique objects NEW 1453

Number of associations from:

DB Associations Total#
TAIR (Arabidopsis) 6241
NASC (Arabidopsis) 1897
Gramene (rice) 26280
MaizeGDB (maize) 5127

Total number of individual object types by source DB:

DB Object Type Object Types Total#
TAIR (Arabidopsis) gene 1876
NASC (Arabidopsis) germplasm 1897
Gramene (rice) gene 1679
Gramene (rice) QTL 8390
MaizeGDB (maize) gene 3470

Total number of associations by evidence code:

Evidence Code Associations Total#
IC 14096
IDA 1835
IEP 4319
IMP 19318
NAS 32
TAS 64

Total number of object types by evidence code:

Object Type Evidence Code Object Type Total#
gene IDA 585
gene IEP 1425
gene IMP 5149
gene NAS 26
gene TAS 50
QTL IC 5602
QTL IMP 2788
germplasm IMP 1897